Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01549 ATGCCGTCGCCTCAGATCCTACCTATAACCCAGCCCCCTTCGTCGTCTCCACTTACCTCAAGGGCCTCAGATGCCAATTCAATTATGGAAACTTCATCTACTGCCTTAGACATAATGTTGCTTAAAGAAGACGATGAACAGAGGACTGGAGTTCTTGTTTCTCCGTTGTTCGAGGATGATAAGACGATAGCTTATAAGCCCCTTCTTCCTAGGACTTCAAGCTATGCTTCCAGCACATCCAGTTCATCCTCCGGAAGCAATACTTACAAGCAGAAGCGGAGGCGAGTCAAGAGCGAAAACTTTTTGTCCTATCTTTCCGGTGACGGCCGCCACCAGACTATTGATCGTGATATCGAGAATGGCAATGCTGATAGAGCTGAGAAATTTCTACTGACTCGCTTCGGTTTGAAACTCTCGAAATATATTCGGGTAGCATTCAGATGGATTGCAAGATTTCTCGCACTTGGTTGCTATTCATTGTTTCTTCTTCCAGGTTTTCTTCAAGTTGGATACTATTATTTCTCATCCAGTCAGATACGCAGAAGTATACCCTATGGTGATAAACCAAGGAATAAGTTGGATCTTTATCTTCCAAAACATATTGACGGGCCAAAACCAGTTGTTGCATTTATTACTGGAGGGGCTTGGATTATTGGCTACAAAGCTTGGGGTTGTCTTCTAGGACAACAATTATCCGAAAGAGGTATCATCGTAGCATGCATCGATTACAGAAATTTTCCTCAGGGAACTATGAGTGATATGATTTATGATGCTTCCCAAGGTATCTCGTTCTTGTGTAATAACATTAGAGAATTTGGAGGCGATCCAAACAGAATTTATCTAATGGGTCAGTCAGCTGGCGCTCATATTGCTGCCTGCACACTTTTGGAGCAAGCAATGAAGGAGGTTCGCAAAGTAGAAAGTATCTCATGGAGTGTGTCCCAGATAAAAGCTTATTTTGGTTTATCAGGAGGGTATAATTTGCTCAATCTAGTAGACTATTTTCACTCTCGAGGTTTATATCGTTCTCTTTTTCTAAGCATAATGGAAGGAGAACAATCCTTGAAACGATTTTCACCCGAATTATTGATCCTGGAAGAACCCAACATGGGAGCTGCAGTCTCGATTCTTCCTCCCATCATTTTATTCCATGGAACAGCAGATTATTCTATTCCATCAGATTCAAGTAAAACTTTTGCTGATACTCTTCAAAGCGTTGGAGTGAAAGCGGAAACATTTTTTTACGAAGGAAAGACACATACAGATGTATTTGTTCAGGATCCGTTGAGGGGAGGCAAAGATCAGATGTTTGAAGATCTTGTGGCGATCATCCATGCCGATGATGCAGAAGCCCTGGCCAAAGATGCGGTGGCACCTCCAAGAAGACGCCTTGTACCCGAATTTATGTTGATGTTGGCTCGTAGTGTTAGCCCCTTCTAA 1440 42.57 MPSPQILPITQPPSSSPLTSRASDANSIMETSSTALDIMLLKEDDEQRTGVLVSPLFEDDKTIAYKPLLPRTSSYASSTSSSSSGSNTYKQKRRRVKSENFLSYLSGDGRHQTIDRDIENGNADRAEKFLLTRFGLKLSKYIRVAFRWIARFLALGCYSLFLLPGFLQVGYYYFSSSQIRRSIPYGDKPRNKLDLYLPKHIDGPKPVVAFITGGAWIIGYKAWGCLLGQQLSERGIIVACIDYRNFPQGTMSDMIYDASQGISFLCNNIREFGGDPNRIYLMGQSAGAHIAACTLLEQAMKEVRKVESISWSVSQIKAYFGLSGGYNLLNLVDYFHSRGLYRSLFLSIMEGEQSLKRFSPELLILEEPNMGAAVSILPPIILFHGTADYSIPSDSSKTFADTLQSVGVKAETFFYEGKTHTDVFVQDPLRGGKDQMFEDLVAIIHADDAEALAKDAVAPPRRRLVPEFMLMLARSVSPF 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7844403 7849253 - CmaCh04G015490.1 Cma04g01549 292630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01549 479 MobiDBLite consensus disorder prediction 12 27 - -
Cma04g01549 479 SUPERFAMILY alpha/beta-Hydrolases 181 443 IPR029058 -
Cma04g01549 479 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 111 469 - -
Cma04g01549 479 ProSitePatterns Carboxylesterases type-B serine active site. 272 287 IPR019826 -
Cma04g01549 479 Gene3D alpha/beta hydrolase 173 428 IPR029058 -
Cma04g01549 479 PANTHER ARYLACETAMIDE DEACETYLASE 111 469 - -
Cma04g01549 479 MobiDBLite consensus disorder prediction 73 89 - -
Cma04g01549 479 Pfam BD-FAE 193 403 - -
Cma04g01549 479 MobiDBLite consensus disorder prediction 1 27 - -
Cma04g01549 479 MobiDBLite consensus disorder prediction 73 95 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01549 Cma-Chr4:7844403 Cma04g02000 Cma-Chr4:12164315 4.58E-179 dispersed
Cma04g01549 Cma-Chr4:7844403 Cma01g00392 Cma-Chr1:1973492 1.97E-165 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01549 K15889 - csv:101206426 854.358