Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01584 ATGGAAGTTAAGAAGCAAATATGGGGAGTGGTTCCATTTTTGGCGATGGTGAGCTTGGAAGGCTGCACCATTGCATTAACCATAATGGCCAAAACAGCCATTACTTATGGAATGACCACTTTTGTATTTGTCGTGTACACAAACGCCGTTGCTTCCATTGTTCTTCTTCCTTATTCCTTGATCTTTCACTACAATGAGAGGACGGAGTTTCAACAATCTTTGTTTTCCTTTCCTCTTTTCCTCCGAGTCTTCCTCTTGGGTTTAATAGGGATATGTGTATCTCAAAACCTAGCATTTTTGGGACTAAGCTACAGCTCTCCTATTGTTGTGTGCGCAATGGGTCTTATGCTTCCGGCCATTTCCTTCGTACTTTCGATCATTCTCGGGAGGACAAAAATTAACTGGAAAAGCCCCAGCTTCATTACCAAAGTAGTAGGGACAATGATATCAGTTATAGGAGCAACATCAGAGGAGCTTTACATAGGCCCAGCAGTGCGTCAACATCCATCATCCTCTTCACATTTACAATTCAAACACAAGCTTCTAGTCTTCACCTCCACAACAGATCGCTGGATCATGGGTGGCCTTTTACTAGCAGCTGCTTCCTTATGCGTCTCAATATGGAACATCATTCAGCTGGGAGTAATAAAACAATATCCTCAAGTCATGAAAGTTGCCTCCTTTTATAGTTTGGTGGGTACCTTACTGTCTGCAGCAGTGGGCTTCTTTGTAGTCAACGATTCAAGTGCATGGACAATCAAATCCAGCTTCGACCTCTTTCTCATTATTGCAACGGGAATTTTTAGCAGTTTGATTCGGAACCGAGTGCAAATATGGTGCATGCAAATGAAAGGGCCATATTACGTGCCCATGTTCAAGCCTTTTGGCATTCTTTTTGCTACCTTGTTTGGCGTGACCTTCTTTGGAGACACTTTTCACTATGGAAGTGTGATGGCAGCATTTATAGCTGGAATGGGATATTTGACAGTAATGTGGGGGCAAATCAACGAAGATAATGGAGTGGGTGAAGACAAAGATGACAAGAATAATGATCATTTGTCTTCTGCCAAACTTCCACTTCTGGACGAAGAATCAAAAGTGTAA 1104 42.3 MEVKKQIWGVVPFLAMVSLEGCTIALTIMAKTAITYGMTTFVFVVYTNAVASIVLLPYSLIFHYNERTEFQQSLFSFPLFLRVFLLGLIGICVSQNLAFLGLSYSSPIVVCAMGLMLPAISFVLSIILGRTKINWKSPSFITKVVGTMISVIGATSEELYIGPAVRQHPSSSSHLQFKHKLLVFTSTTDRWIMGGLLLAAASLCVSIWNIIQLGVIKQYPQVMKVASFYSLVGTLLSAAVGFFVVNDSSAWTIKSSFDLFLIIATGIFSSLIRNRVQIWCMQMKGPYYVPMFKPFGILFATLFGVTFFGDTFHYGSVMAAFIAGMGYLTVMWGQINEDNGVGEDKDDKNNDHLSSAKLPLLDEESKV 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8027002 8029654 + CmaCh04G015840.1 Cma04g01584 292665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01584 367 PANTHER WAT1-RELATED PROTEIN 9 364 IPR030184 GO:0016021|GO:0022857
Cma04g01584 367 PANTHER WAT1-RELATED PROTEIN 9 364 - -
Cma04g01584 367 Pfam EamA-like transporter family 24 154 IPR000620 GO:0016020|GO:0016021
Cma04g01584 367 MobiDBLite consensus disorder prediction 341 367 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01584 Cma-Chr4:8027002 Cma04g02720 Cma-Chr4:18350626 4.16E-69 dispersed
Cma04g00292 Cma-Chr4:1449636 Cma04g01584 Cma-Chr4:8027002 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01584 - - csv:101210157 612.838