Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g01611 | ATGACGGAGAGGACCTCCTCTTCTAACACGGTTCGACTTGGCCGAGTCCAGCCGCAGGCTCCTGGACATCGTACCATCTTCTGTAATGATCGCGACGCTAATCTCCTTGTCAAATTCAAGGGGAATTCGGTCTCGACGACGAAGTACAACTTCTTCACCTTCTTTCCGAAAGGGTTGTTTGAACAGTTCAGGCGTGTGGCTAACCTATACTTTCTTACCATCTCAATCTTATCCACCACACCCATCAGTCCTGTGCATCCAATTACAAATGTGGTCCCTTTAAGTCTGGTTCTTCTTGTCTCTCTCATTAAAGAAGCATTCGAGGACTGGAAACGATTCCAGAATGATATGGCAATTAATAATAATCTCATAGATGTGCTACAAGATCAAAAGTGGGAGAGTGTTCCTTGGAAAAGGTTGCAGGTTGGGGACATTGTTAGGGTTCGGCAAGATGGATATTTTCCTGCGGATATTCTTTTCCTTGCTAGTACAAATCCAGATGGTGTCTGCTACATTGAGACTGCTAACCTGGATGGGGAGACAAATTTGAAGATTAGGAAGGCCCTGGAAAAGACGTGGGATTACCTGACTCCAGAGAAGGCATCTGAATTTAAAGGTGAAGTACAATGCGAGCAACCAAACAATTCACTCTACACTTTCACAGGCAATGTTATAATTCAGAACCAAACGTTACCTCTCAGCCCAAACCAACTTTTATTGCGAGGATGCAGTCTCAGGAACACTGAGTATATAGTTGGGGCTGTTGTTTTTACTGGCCATGAAACAAAGGTTATGATGAATGCTATGAATGTTCCCTCCAAAAGGAGTACCCTAGAAAAGAAACTTGACAAACTTATACTTACACTATTTGCTACTCTCTTTATGATGTGTTTGATTGGAGCCATTGGCAGTGGCGTGTTTGTAAACCAAAAGTACTACTACCTAGCTCTTGATAAGGGAGGGGAAAACCAATTCAACCCTCGCAATCGATTCCTGGTTGTTGTTTTGACCATGTTTACTCTGATTACTCTGTACTCGACAATTATTCCTATTTCTCTATATGTTTCCATTGAGATGATCAAATTTATTCAATCAACACAATATATCAACAAGGATCTGAATATGTTCCATGCTGATAGCAATACCCCTGCACTGGCTAGAACTTCTAATCTGAACGAAGAACTTGGACAGGTAGAGTACATCTTTTCAGATAAAACTGGTACTCTTACTAGGAATCTAATGGAGTTCTTTAAGTGTTCAATTGGTGGAGAGGTTTATGGCACTGGTATCACTGAAATAGAGAGGGGAATTGCTGAGCAGAATGGCTTGAAAGTGGAAGAGGTGCACAAATCAGCAAATGCTGTACAAGAAAAGGGATTTAACTTCGATGATGCTAGGCTTATGAGAGGAGCATGGAGAAATGAACCCAACTCTGATCTTTGTAAGGAATTTTTCAGATGCCTTGCTATTTGTCATACTGTACTCCCTGAGGGAGACGAATCCCCAGAAAAGATCATTTATCAAGCTGCATCACCTGATGAGGCTGCCTTAGTAACTGCGGCTAAAAACTTTGGCTTCTTCTTTTACAGGCGCACACCTACTACAATATATGTTCGAGAATCTCATGTTGAGAAGATGGGAAAAATCCAAGATGTTTCGTATGAAATTCTCAATGTACTTGAGTTCAATAGTGTAAGGAAGCGTCAGTCTGTTGTGTGTCGTTATTCTGATGGTAGGCTTGTCTTGTACTGCAAGGGTGCTGATACCGTAGTATATGAGAGATTGGCTGGTGGAAATGATGATTTGAAGAATGTAACTAGGAAACACTTGGAGAAATTTGGATCTTCCGGTTTGAGAACCCTATGCCTTGCTTACAGAGATTTGCATCCTGACGTGTATGAAAGCTGGAATGAGAAGTTCATTCAAGTTAAGTCTTCATTAAGAGATCGTGAAAAGAAATTGGATGAGGTTGCAGAACTTATAGAGAAAGACCTTATTTTGATTGGCTGTACTGCTATAGAAGATAAACTTCAAGAAGGAGTACCAAACTGTATACAGACGCTTTCTCGAGCTGGTATCAAGATTTGGGTGCTAACAGGAGACAAGATGGAAACTGCTATTAATATAGCTTATGCGTGCAATTTAATAAACAATGAAATGAAGCAATTTATTATCAGTTCAGAAACGGATGCAATCCGAGAAGTTGAAAACAGGGGTGACCAAGTAGAACTTGCACGTTTTACTAGAGAAGAAGTAAAAAGGGAACTGAAACATTGTCTTGAGGAAGCGCAGCGGTGTTTACAATCTGTGTCTCCACCAAAATTAGCACTTGTTATAGATGGAAAATGTTTGATGTATGCATTAGATCCAAGTCTGCGAGTTACTTTACTAAGCTTGAGCTTGAATTGTAGTTCAGTTGTTTGCTGCCGGGTTTCTCCTTTGCAGAAAGCGCAGGTGACAAGTCTGGTGAAGAAAGGTGCACAGAAAATAACACTCAGTATTGGTGATGGTGCTAATGATGTTAGCATGATTCAAGCATCTCACGTGGGCGTTGGAATAAGTGGACAGGAGGGAATGCAAGCAGTGATGGCTAGTGATTTTGCTATTGCTCAGTTTCGCTTTCTCACAGATTTACTTCTTGTACATGGGCGATGGTCATATCTTAGAATATGCAAGGTCGTCACGTACTTCTTTTACAAGAATCTTACTTTCACTTTAACTCAGTTTTGGTTCACCTTCCAAACCGGATTTTCTGGTCAAAGATTCTATGATGATTGGTTCCAGTCGTTGTATAATGTCATATTTACCGCCCTACCTGTAATAATTGTTGGACTATTTGACAAGGATGTCAGTGCTTCCCTATCCAAAAAGTACCCTGAGCTCTACAGAGAGGGAATAAGAAATGCATTTTTTAAGTGGAGAGTTGTGACAACTTGGGCTTTCTTTTCCATCTACCAATCTTTAGTCTTTTATTTTTTTATAACCGTTTCTAGTTCCAGCAGTCAATCGTCATCTGGCAGGGTGTTTGGTCTGTGGGATATCAGCACGATGACTTTCACATGCATTGTAGTGACTGTGAATTTGCGTCTGCTTATGATCTGCAATTCAATTACCCGGTGGCATTACATTACGGTTGGGGGAAGCATTTTAGCTTGGTTCCTATTTATTTTCTTATATTCTGGTATTATCACACCACATGATAGGCAGGAAAATGTATATTTCGTCATATATGTCTTAATGAGTACATTATACTTTTATGTAGCTGTTCTTCTTGTCCCCATTGTTGCACTTCTCTGTGATTTCGCGTACCAAGGCATTCAGAGATGGTTTTTCCCTTACGATTATCAGATAGTACAAGAAATACATAGACATGAACCTGAAGGCAGAGGTACGGCAGGATTGCTGGAGATTCAGAACCATCTTACACCGGAGGAGGCAAGAAGTTATGCCATGTCTCAACTCCCTCGAGAATTATCGAAGCACACTGGCTTTGCTTTCGACTCACCTGGCTACGAGTCATTTTTTGCCGCACAGCTTGGTATTTATGCCCCACAGAAAGCATGGGATGTTGCTAAGAGAGCCAGTGTGAAATTGAGGCCAAAGAATAGGGAAAAAAAGCTTGGAGCTGTGGCGGTGGGGCTGTTTCTAGGGATTTTAACCGTCGGCTCGCCACCACCGGGGAAAACAACAAGCTGGCCCTGGCCAGCAGCTGGGTCTGAGGTTGAGGGAAGAAGCCCTGTCATGAAGCAGCTGACTCAAATTCTATTGTTCTCTGAGAATGGAGAGATCGCTGCGTTGGTGACCGGGTTTCTTCGAGACGATCTTTAA | 3828 | 41.69 | MTERTSSSNTVRLGRVQPQAPGHRTIFCNDRDANLLVKFKGNSVSTTKYNFFTFFPKGLFEQFRRVANLYFLTISILSTTPISPVHPITNVVPLSLVLLVSLIKEAFEDWKRFQNDMAINNNLIDVLQDQKWESVPWKRLQVGDIVRVRQDGYFPADILFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNVIIQNQTLPLSPNQLLLRGCSLRNTEYIVGAVVFTGHETKVMMNAMNVPSKRSTLEKKLDKLILTLFATLFMMCLIGAIGSGVFVNQKYYYLALDKGGENQFNPRNRFLVVVLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQYINKDLNMFHADSNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEIERGIAEQNGLKVEEVHKSANAVQEKGFNFDDARLMRGAWRNEPNSDLCKEFFRCLAICHTVLPEGDESPEKIIYQAASPDEAALVTAAKNFGFFFYRRTPTTIYVRESHVEKMGKIQDVSYEILNVLEFNSVRKRQSVVCRYSDGRLVLYCKGADTVVYERLAGGNDDLKNVTRKHLEKFGSSGLRTLCLAYRDLHPDVYESWNEKFIQVKSSLRDREKKLDEVAELIEKDLILIGCTAIEDKLQEGVPNCIQTLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIISSETDAIREVENRGDQVELARFTREEVKRELKHCLEEAQRCLQSVSPPKLALVIDGKCLMYALDPSLRVTLLSLSLNCSSVVCCRVSPLQKAQVTSLVKKGAQKITLSIGDGANDVSMIQASHVGVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYREGIRNAFFKWRVVTTWAFFSIYQSLVFYFFITVSSSSSQSSSGRVFGLWDISTMTFTCIVVTVNLRLLMICNSITRWHYITVGGSILAWFLFIFLYSGIITPHDRQENVYFVIYVLMSTLYFYVAVLLVPIVALLCDFAYQGIQRWFFPYDYQIVQEIHRHEPEGRGTAGLLEIQNHLTPEEARSYAMSQLPRELSKHTGFAFDSPGYESFFAAQLGIYAPQKAWDVAKRASVKLRPKNREKKLGAVAVGLFLGILTVGSPPPGKTTSWPWPAAGSEVEGRSPVMKQLTQILLFSENGEIAALVTGFLRDDL | 1275 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 8128274 | 8144426 | - | CmaCh04G016110.1 | Cma04g01611 | 292692 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g01611 | 1275 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 807 | 913 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cma04g01611 | 1275 | Pfam | E1-E2 ATPase | 124 | 355 | - | - | |
Cma04g01611 | 1275 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 7 | 1199 | - | - | |
Cma04g01611 | 1275 | CDD | P-type_ATPase_APLT_Dnf-like | 41 | 993 | - | - | |
Cma04g01611 | 1275 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 467 | 673 | IPR023299 | GO:0000166 | |
Cma04g01611 | 1275 | Pfam | Cation transport ATPase (P-type) | 503 | 594 | - | - | |
Cma04g01611 | 1275 | PRINTS | P-type cation-transporting ATPase superfamily signature | 834 | 853 | - | - | |
Cma04g01611 | 1275 | PRINTS | P-type cation-transporting ATPase superfamily signature | 402 | 416 | - | - | |
Cma04g01611 | 1275 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 862 | 1112 | IPR032630 | - | |
Cma04g01611 | 1275 | SFLD | p-type atpase | 384 | 885 | IPR044492 | - | |
Cma04g01611 | 1275 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 34 | 1112 | IPR023298 | - | |
Cma04g01611 | 1275 | SFLD | Haloacid Dehalogenase | 384 | 885 | - | - | |
Cma04g01611 | 1275 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 404 | 410 | IPR018303 | - | |
Cma04g01611 | 1275 | SUPERFAMILY | Calcium ATPase, transduction domain A | 122 | 265 | IPR008250 | - | |
Cma04g01611 | 1275 | Gene3D | - | 104 | 269 | - | - | |
Cma04g01611 | 1275 | Gene3D | - | 513 | 667 | IPR023299 | GO:0000166 | |
Cma04g01611 | 1275 | Pfam | Phospholipid-translocating ATPase N-terminal | 26 | 90 | IPR032631 | - | |
Cma04g01611 | 1275 | Gene3D | - | 668 | 874 | IPR023214 | - | |
Cma04g01611 | 1275 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 7 | 1199 | - | - | |
Cma04g01611 | 1275 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 39 | 1120 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Cma04g01611 | 1275 | SUPERFAMILY | HAD-like | 397 | 890 | IPR036412 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g01611 | Cma-Chr4:8128274 | Cma13g01049 | Cma-Chr13:7987560 | 0 | dispersed | |
Cma04g00317 | Cma-Chr4:1554381 | Cma04g01611 | Cma-Chr4:8128274 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g01611 | K14802 | - | csv:101207069 | 2309.26 |