Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g01626 | ATGGGTCGAAAGAGAGATAAACCTTACCCTTCCACCCACCACTCTACGTCCTTCGCTAAGAGGCGGCGCCATCAGCCGCCGGCATCGTTGCCTGCGGAGGACGATGATGTGGACAAGCCCTTGCCGAAGCCTGCGCCGCCGCTTGCCCTAGTCGTCGTTGACCTTCCGTCACACTGCTCGGTGCTTGACTTGAAGTCCCGATTTGAAATCTACGGATCCATCTCCCGCATCCGCATCGACCGTGATTGTGTTGGCTACATCATGTATCGTACCAAAGACTCCGCTGATGCTGCCATGGCCGCTGCTCTCGATCCCTCATTCGGCTTCACCATTGATTCCAAAAAGGTTCAGGTATTATGGGCGAATGATCCTCAAGTGCAATGGCGGCAAGGGATTAACGTTGGTGTTAACAAGAACAAGGAAATGTCATCGAAGCTCTTGCGGGCAGAAGTGCCACTGAGTAGACATGGAAGAGGCAATAAGCTTGCTTCAACCATTGTCAACCCCAGAAAAAGCAATAGTTCGTCAAGGTCCGATGAGCCTTTCAGGGGCAGGGAAGTTGTTGCTTACGATGATATTCTCTAA | 585 | 52.14 | MGRKRDKPYPSTHHSTSFAKRRRHQPPASLPAEDDDVDKPLPKPAPPLALVVVDLPSHCSVLDLKSRFEIYGSISRIRIDRDCVGYIMYRTKDSADAAMAAALDPSFGFTIDSKKVQVLWANDPQVQWRQGINVGVNKNKEMSSKLLRAEVPLSRHGRGNKLASTIVNPRKSNSSSRSDEPFRGREVVAYDDIL | 194 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 8198677 | 8199986 | - | CmaCh04G016260.1 | Cma04g01626 | 292707 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g01626 | 194 | SMART | rrm1_1 | 49 | 119 | IPR000504 | GO:0003723 | |
Cma04g01626 | 194 | MobiDBLite | consensus disorder prediction | 26 | 41 | - | - | |
Cma04g01626 | 194 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 50 | 101 | IPR000504 | GO:0003723 | |
Cma04g01626 | 194 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Cma04g01626 | 194 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 48 | 123 | IPR000504 | GO:0003723 | |
Cma04g01626 | 194 | MobiDBLite | consensus disorder prediction | 160 | 181 | - | - | |
Cma04g01626 | 194 | CDD | RRM_SF | 52 | 94 | - | - | |
Cma04g01626 | 194 | SUPERFAMILY | RNA-binding domain, RBD | 32 | 133 | IPR035979 | GO:0003676 | |
Cma04g01626 | 194 | Gene3D | - | 2 | 129 | IPR012677 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g01626 | - | - | bhj:120081339 | 319.701 |