Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01674 ATGACGAGAGCTTTTAGAAGACGAAGTCTGTGTTCAAGGCCCATAGATCGTCTCCGATTCCAGGCATCGGCGGACGGTGCTCCGAAATCGGGATTCCTCAGAGATATGAAGGTGAAGGAGATCTTTACTTATTTGCTTATAGGTCTTCCGTTGGTCGTTTTTGTTGTTTTGGTGTTCAGGAATCCGGCGGCGGATCTCTCTTTGGGTTTTGCTGAAGCCAGAGCATTGGAAAGAGTGGTCACTAATGGCAGTTCTGAGAGTTCAGGTTCAGAAAACGGTTTCTCTAGACTCTCCAATAGAGACAAGCTTATTGGAGGCCTTCTCATTCCTGGATTTGATGAAGGATCATGCTTGAGTAGATATCAATCCAGTTTATATCGAAGAACTTTGACCCACAGACCGTCTCCTTACCTCCTCTCGAAGCTTAGAGACTATGAAGCGCTTCATCGACGATGTGGTCCGCATACAAAACTATATGATGAAGCAGTAGAGCAGCTCAGATCTGGCAGTAGTGTTCGTTTGACAGAGTGTAAATATGTTGTGTGGATGTCTTATAGTGGCTTGGGAAATAAGATACTCACTTTGGCTTCTGCATTCCTCTATGCCGTTCTTACCGATCGTGTCTTGCTTGTCGATCCGGGGAAGGATATGGCTGATCTATTTTGTGAGCCCTTCCCAGAAAAAACTTGGCTGCTACCAAATGACTTCCCCTTGATGGATCAATTCAGCAACTTTAATCAGAAATCTCCTAATTGTCATGGATATATGCTTAAGACGAACACTCTAAACGAATCGACAGAAGCGCTCCCATCCTATCTATACCTACATTTGGTTCATGATTATGATGATCATGACAAGCTTTTCTTCTGTGATCAAGAACAGGCTCTTTTAAGTAGGGTCCCTTGGCTGATACTCAAGACAGATAACTACTTTGTTCCATCTCTCTTCCTGATCCCGTCTTTCGAGCACGAACTGAGTAACTTATTCCCCCAAAAAGACAACGTGTTTCATCATCTGGGTCAATATCTTTTCCACCCATCGAATCACGTTTGGGGACTGATTACGAGATACTACGAAGCATATCTGTCAAGTGCAGATGAAGTGATAGGAATTCAAGTAAGAGTGTTCGAGAGTGGATCGGGACCATTCGAACATATAATGGATCAGATTTTAAGCTGTACTCTTCAGGAGAAGATACTTCCCGACGTAGACAAGGAAGACTTCTCTTCGGTTCCCTTGGAACGCCCAAGAGTGAAAGCGGTTTTGATGACATCCTTGAGTTCTGGATATTATGAAAAATTGAGAACCTTGTACTGGGAATACCCAACCACAACGGGAGAGGTCATTGCAGTTCACCAGCCAAGCTACGAAATGTATCAGCAGACTGAGAAGAAGGCTCACAACAGGAAAGCATGGGCAGAAATGTACCTTCTGAGTATGAGCGATGTATTAGTGACCAGTGCATGGTCGACGTTTGGGTATGTGGCTCAAGGACTCGGGGGATCGAAGCCATGGATTCTTTACAAGGCGGAGAACATGACCACGCCCGATCCAGCGTGTCGTAGGGCGATGTCAATGGAGCCTTGCTTTCATGCTCCTCCGTTCTATGATTGCAAGGCAAAGAAAGGAATAGATACTGGTGTAGTTGTTCCACATGTTTTAGTTAGTAAGGCGCCACCTCCTACATTTCCTCGAATAGATGGAGCAGTCAAGACAATCACTCTTCCTGAAGATGTATATGTAAAAAAGTTCTTCCAGAAACATCCAGATTCAAAATACGAAGATGCGATCAAGTTCTGTAGTTTCGATCCTCCTCCAGCCCGAATATTCGGCTTGCGAGTGCTTGAACTGAAGGAACAGGGTGTCAGTGAGGAGGAAGCCATGGCAGTAGCCAATATGGAATACCGGGCAGAGAAAAAGGCGAAAAAGAAGGCTTACTCTCGCTTGAAGCAAATTGCACGTCTTCAAGGGAAGAAACCTCCTCCTAACCCGTATCCAAGCGCTATTAAGGAGATACAAGCCGAGGAAAGGAAATTCGTGCGAGATCGTTTCTTCAACCCCAAGATTAAAGAGATCGCTCAAAGGTTGAAGGAGGAGAGAGCAGCTGAAATGCAGGACAGAATGAGAGGCAGTGGCTGTTCATTGGCAAATCCAAGTCTCTAA 2163 45.03 MTRAFRRRSLCSRPIDRLRFQASADGAPKSGFLRDMKVKEIFTYLLIGLPLVVFVVLVFRNPAADLSLGFAEARALERVVTNGSSESSGSENGFSRLSNRDKLIGGLLIPGFDEGSCLSRYQSSLYRRTLTHRPSPYLLSKLRDYEALHRRCGPHTKLYDEAVEQLRSGSSVRLTECKYVVWMSYSGLGNKILTLASAFLYAVLTDRVLLVDPGKDMADLFCEPFPEKTWLLPNDFPLMDQFSNFNQKSPNCHGYMLKTNTLNESTEALPSYLYLHLVHDYDDHDKLFFCDQEQALLSRVPWLILKTDNYFVPSLFLIPSFEHELSNLFPQKDNVFHHLGQYLFHPSNHVWGLITRYYEAYLSSADEVIGIQVRVFESGSGPFEHIMDQILSCTLQEKILPDVDKEDFSSVPLERPRVKAVLMTSLSSGYYEKLRTLYWEYPTTTGEVIAVHQPSYEMYQQTEKKAHNRKAWAEMYLLSMSDVLVTSAWSTFGYVAQGLGGSKPWILYKAENMTTPDPACRRAMSMEPCFHAPPFYDCKAKKGIDTGVVVPHVLVSKAPPPTFPRIDGAVKTITLPEDVYVKKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEEEAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGCSLANPSL 720
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8413327 8421263 - CmaCh04G016740.1 Cma04g01674 292755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01674 720 Gene3D - 353 515 - -
Cma04g01674 720 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 6 553 - -
Cma04g01674 720 Pfam Xyloglucan fucosyltransferase 98 539 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cma04g01674 720 Gene3D - 174 225 - -
Cma04g01674 720 PANTHER FUCOSYLTRANSFERASE 2-RELATED 6 553 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01674 Cma-Chr4:8413327 Cma13g01145 Cma-Chr13:8426670 1.87E-112 dispersed
Cma16g00475 Cma-Chr16:2401539 Cma04g01674 Cma-Chr4:8413327 1.21E-171 transposed
Cma01g00798 Cma-Chr1:4301842 Cma04g01674 Cma-Chr4:8413327 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01674 K13681 - csv:101216541 967.222