Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01697 ATGTCGTCCGCCGAGAAGGAAAGGGAAACGCAGGTCTACATGGCCAAGCTTTCTGAACAGGCTGAACGCTACGACGAAATGGTGGAGTGTATGAAACAAGTTGCTAAACTAGATGTTGAGCTAACCATGGAAGAGAGAAACTTGCTTTCTGTTGGATACAAAAATGTTATAGGTGCTCGGCGAGCTTCTTGGCGCATCATGTCCTCAATTGAACAGAAGGAGGAGTCCAAAAGCAATGAGAATAATGTTAAACTTATTAAAGGTTACCGTCACAAGGTGGAGGAGGAGCTTTCCAAGATCTGCACCGATATTCTGACTATTATTGACAACCATCTCATTCCTTCTTCAACTTCTTCAGAAGCATCGGTCTTTTATTACAAGATGAAAGGTGATTATTACCGATATCTTGCTGAATTCAAAACAGATCAAGAAAGAAAGGAGGCAGCTGACCAGTCATTGAAAGGATACGAGACTGCATCGAGCACCGCAAATACTGATCTCCCATCAACCCACCCAATCCGTCTTGGGCTTGCTCTCAACTTTTCTGTCTTCTACTATGAGATTATGAACTCCCCTGAAAGGGCTTGCCACTTGGCTAAACAAGCTTTTGACGAGGCAATTGCAGAGTTGGATACTTTGAGTGAGGAATCATACAAGGACAGTACCCTCATAATGCAGTTGCTGAGAGACAACCTTACTCTCTGGACATCTGATTTACCAGAAGATGGAGGTGAAGAAAACGTCAAAGGTGAGGACTCCAAACCCGCAGTACCAGCCACCGAGCAGCAGTAA 792 44.32 MSSAEKERETQVYMAKLSEQAERYDEMVECMKQVAKLDVELTMEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKSNENNVKLIKGYRHKVEEELSKICTDILTIIDNHLIPSSTSSEASVFYYKMKGDYYRYLAEFKTDQERKEAADQSLKGYETASSTANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENVKGEDSKPAVPATEQQ 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8531498 8534298 + CmaCh04G016970.1 Cma04g01697 292778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01697 263 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Cma04g01697 263 SMART 1433_4 8 250 IPR023410 -
Cma04g01697 263 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Cma04g01697 263 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Cma04g01697 263 Pfam 14-3-3 protein 14 236 IPR023410 -
Cma04g01697 263 PANTHER BNAC03G57490D PROTEIN 4 254 - -
Cma04g01697 263 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Cma04g01697 263 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Cma04g01697 263 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Cma04g01697 263 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Cma04g01697 263 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Cma04g01697 263 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Cma04g01697 263 Coils Coil 196 216 - -
Cma04g01697 263 MobiDBLite consensus disorder prediction 238 263 - -
Cma04g01697 263 Gene3D - 1 250 IPR036815 -
Cma04g01697 263 PANTHER 14-3-3 PROTEIN 4 254 IPR000308 -
Cma04g01697 263 PIRSF 14-3-3 2 248 IPR000308 -
Cma04g01697 263 Coils Coil 14 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01697 Cma-Chr4:8531498 Cma05g00448 Cma-Chr5:2058099 1.04E-174 dispersed
Cma04g01697 Cma-Chr4:8531498 Cma12g00101 Cma-Chr12:400660 8.84E-178 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01697 - K06630 csv:101221275 472.241