Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01699 ATGGCTGTCTTAGCATTCTTAGTGTTCTTCCTTGCCATAACTGGTCGATCTTATGCCAACTATTGCTTGTGTAGAGATGGGGTGAGCCAACAAATCCTTCAAAAGGCAATAGACTACGCATGTGGAGCTGGAGCTGACTGTTCTCCAATCCTCACCAATGGCGCTTGTTTTCAGCCCAACACCGTCAAAGATCACTGCAACTACGCCGTCAACAGCTATTTCCAGCGGAAGGGACAAGTCCAAGGAAGCTGCGACTTCAGCGGCGCCGCCACGCCCAGCGTTACCCTCACCGCTACCGTGCCCTCTGGTTGCGTCTATCCTTCTAGCCCCAGCAATGCGGGAACAACACCGACGAGCCCCAGTGGAACTACGCCGACGATGACTCCACCAGGGATGCCGACGATGACTCCACCAGGGATGCCGACGATGACTCCACCAGGGACGCCGTCGTCGACGAGTCCGGGAATGACGCCATCGGTGTTCAACAACGGAATCAGCCCGAGTGGGAGCGGCGGTTTCAACGATGGCAGCGGCAGTGTGGGTTTCAGTGATAATAGAAACTTGCTTTTGGCTGTGGGCTCAACTTTGTGGTTAGCCGTAGTGTTTCTCTGGGGATGA 618 55.02 MAVLAFLVFFLAITGRSYANYCLCRDGVSQQILQKAIDYACGAGADCSPILTNGACFQPNTVKDHCNYAVNSYFQRKGQVQGSCDFSGAATPSVTLTATVPSGCVYPSSPSNAGTTPTSPSGTTPTMTPPGMPTMTPPGMPTMTPPGTPSSTSPGMTPSVFNNGISPSGSGGFNDGSGSVGFSDNRNLLLAVGSTLWLAVVFLWG 205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8539338 8540832 + CmaCh04G016990.1 Cma04g01699 292780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01699 205 MobiDBLite consensus disorder prediction 153 172 - -
Cma04g01699 205 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3-LIKE ISOFORM X1 1 195 - -
Cma04g01699 205 SMART X8_cls 20 106 IPR012946 -
Cma04g01699 205 MobiDBLite consensus disorder prediction 123 152 - -
Cma04g01699 205 PANTHER BETA-1,3 GLUCANASE 1 195 IPR044788 -
Cma04g01699 205 Pfam X8 domain 21 91 IPR012946 -
Cma04g01699 205 MobiDBLite consensus disorder prediction 109 172 - -
Cma04g01699 205 Gene3D - 17 107 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01699 Cma18g01108 CCT
Cma04g01699 Cma18g01108 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01699 Cma-Chr4:8539338 Cma12g00099 Cma-Chr12:392552 2.29E-59 dispersed
Cma18g01108 Cma-Chr18:9046835 Cma04g01699 Cma-Chr4:8539338 7.09E-95 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01699 - - cmax:111482519 305.834