Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01700 ATGTATATGGTAGAGAGTAAAGAAGGTGCCATAGCATGTATGGTATTGTCGCTCTGCTTCTTGGGGACCTTCCCTGCACTTTTGACTCTCCTCGAACGACGGGGGCGACTTCCTCAACATACTTACCTTGATTACTCCATAACTAACTTTTTAGCTGCTGTAATCATTGCTTTCACACTTGGTGAGGTTGGAAAGAGCTCAGATGCTTCTCCAAATTTTATCCAGCAGCTTTCTCAGGATAATTGGCCTTCTGTCATGTTTGCGATGGCGGGCGGTGTAGCATTAAGTCTCGGAAATCTTTCATCTCAATATGCTTGGGCATTTGTTGGTTTATCTGTTACAGAAGTGCTCATTTGTAGCATAATAGTAGTTATAGGCTCAACATTGAACTACTTTCTTGATGACAAGATTAACAAAGCTGAGATCCTTTTCCCTGGCGTTGCTTGCTTTGTGATTGCGGTATGTCTTGGTTCTGCTGTTCACTCGTCCAACACGGCTGATAACAAAGCAAAGCTGAACAGTTTGTCGGCCAATTCCGATAAAGAGTTGAAGCCAATAGATGTCGCTGGATTTCCTAGTAGGGTTGAATCAACGGACCCGGAGAATGCTGATGGTTCGTCGCGAAAGGCCGAGGCTGGGACTGCAGATTTTCTTGTTCAGCTTGAAAACAGACGATCCATCAAGGTGTTCGGTAAGGGCACAGTAATTGGATTGTGCTTAACTTTCTTTGCTGGTGTTTCCCTTTCTCTGTTCTCACCTGCATTCAATTTGGCCACAAACGATCAATGGCACACTCTAAAGAAAGGTGTGCCACACTTGGCTGTCTATACCGCATTTTTCTACTTCTCCGCCTCTTGTTTTGTCATAGCCATCGTTCTCAACATCATCTTCCTTTACCGCCCTCTACTTAACTTACCCAAAACAACGTTCAAAGCATATCTGAATGACTGGAATGGTAGAGGATGGGCCTTCTTGGCTGGATTTCTGTGTGGGTTTGGCAATGGTCTGGAGTTCATGGGCGGCCAAGCTGCTGGATATGCAGCAGCTGATTCTGTGCAGGCATTTCCACTCGTGAGCACGTTCTGGGGAGTTGTTCTATTTGGAGAATACCGTCGATCATCGAGGAGAACATACGTGTTGCTTGTCAGCATCTGTTGGGATCCTAATGGCTTCATCAGGACATCGAAAACCTTAGAAGAACCAGTCATAAGCGCATCGCAGCAGCAGCCAAGA 1233 45.58 MYMVESKEGAIACMVLSLCFLGTFPALLTLLERRGRLPQHTYLDYSITNFLAAVIIAFTLGEVGKSSDASPNFIQQLSQDNWPSVMFAMAGGVALSLGNLSSQYAWAFVGLSVTEVLICSIIVVIGSTLNYFLDDKINKAEILFPGVACFVIAVCLGSAVHSSNTADNKAKLNSLSANSDKELKPIDVAGFPSRVESTDPENADGSSRKAEAGTADFLVQLENRRSIKVFGKGTVIGLCLTFFAGVSLSLFSPAFNLATNDQWHTLKKGVPHLAVYTAFFYFSASCFVIAIVLNIIFLYRPLLNLPKTTFKAYLNDWNGRGWAFLAGFLCGFGNGLEFMGGQAAGYAAADSVQAFPLVSTFWGVVLFGEYRRSSRRTYVLLVSICWDPNGFIRTSKTLEEPVISASQQQPR 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8543525 8547403 + CmaCh04G017000.1 Cma04g01700 292781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01700 411 PANTHER BNAC09G21970D PROTEIN 1 384 - -
Cma04g01700 411 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 1 384 IPR030189 GO:0016021|GO:0022857|GO:0071705
Cma04g01700 411 Pfam Ureide permease 41 384 IPR009834 GO:0016021|GO:0071705
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01700 Cma18g01107 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01700 Cma-Chr4:8543525 Cma17g01273 Cma-Chr17:8633593 0 dispersed
Cma04g01700 Cma-Chr4:8543525 Cma04g01701 Cma-Chr4:8551748 0 tandem
Cma18g01106 Cma-Chr18:9036267 Cma04g01700 Cma-Chr4:8543525 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01700 - - csv:101221292 617.461