Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01703 ATGGCAGCGACGGGTAGATGTGAAACAAGCTCACATTCAACAAAACAGCCAGATATTATAGGTTTAGGCAGTACACATTCTGAAGATACTGCTGGGGAAGGATTTTCACTTTCCCCAACAGGGCAGCTGGCGTATGGGTCTTCATCATGTATAAACTTGATGGAATTGTCAGATCTCGTTCAAGTGGACGAAAATGTTAACCGACCCGAAGGAGGCACAATTTGCTTGGGAAATCCTGATCACGATGTTTACCAGCTTCAATTTAAAGATGATGAGAGCGATGTTTCCAGCCTTTGTTCTGCCAAATCAGAGAAGAGTAGCGGTTCTCAAGGTCCCACGTCTGCATCTCAAGTTTCTGATATTACCCATGAGTCTGGTGGAAATGTTATGTCTCCAACCCAGTCCCCTCCTCTTCAGACAATGGATCGTGTGGGAGGATATGAACCATATGATCCGTTAAGAATTCCGTCTGCAGTTTTCCAAAGAAGTAGATCAACCACTCCATTGGAATGGAGTATTGCTTCAAATGAGTCCTTGTTTAGCATTCATGGTGGAGACGATAGTTTCTCCGGAGATAATTTGTCGATGTTGAGTGATTTAGGGAAGTCAGACGAGTTGCTTGTATTTAACTCAGCACCTGCAGTTATCACGTCAAGAGAAACTGAAATGAAGAGTGTCGAATACGAAGAGGAGCCTAAAGTGGCAGATACCACAGAATATAACATTGAGGATAGAGAGGGTTTGGTTGCAGAAGATCTAAGTGGAAGAAACGTACTGCCTCCTGCATTATCATCGAGTTCCTCTAGCAGATCTCGCCACTCTGAAAGAAGTCAATGCAGCTCAAATTCCTTCGCTTTCCCCATTTTGGCCGATGAGGAGGCTCAGGATGGATCTGTGCTTGCGGATGATAAAATAGAAGGTGCTCCA 927 44.34 MAATGRCETSSHSTKQPDIIGLGSTHSEDTAGEGFSLSPTGQLAYGSSSCINLMELSDLVQVDENVNRPEGGTICLGNPDHDVYQLQFKDDESDVSSLCSAKSEKSSGSQGPTSASQVSDITHESGGNVMSPTQSPPLQTMDRVGGYEPYDPLRIPSAVFQRSRSTTPLEWSIASNESLFSIHGGDDSFSGDNLSMLSDLGKSDELLVFNSAPAVITSRETEMKSVEYEEEPKVADTTEYNIEDREGLVAEDLSGRNVLPPALSSSSSSRSRHSERSQCSSNSFAFPILADEEAQDGSVLADDKIEGAP 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8556720 8558448 + CmaCh04G017030.1 Cma04g01703 292784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01703 309 PANTHER SUPPRESSOR SRP40-LIKE PROTEIN 17 302 - -
Cma04g01703 309 MobiDBLite consensus disorder prediction 222 251 - -
Cma04g01703 309 PANTHER - 17 302 - -
Cma04g01703 309 MobiDBLite consensus disorder prediction 259 279 - -
Cma04g01703 309 MobiDBLite consensus disorder prediction 1 39 - -
Cma04g01703 309 MobiDBLite consensus disorder prediction 220 279 - -
Cma04g01703 309 MobiDBLite consensus disorder prediction 97 139 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01703 Cma18g01104 CCT
Cma04g01703 Cma18g01104 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01703 Cma-Chr4:8556720 Cma10g00294 Cma-Chr10:1332022 4.71E-13 dispersed
Cma15g00235 Cma-Chr15:1152089 Cma04g01703 Cma-Chr4:8556720 2.02E-11 wgd
Cma18g01104 Cma-Chr18:9028771 Cma04g01703 Cma-Chr4:8556720 2.12E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01703 - - cmos:111458373 523.857