Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01705 ATGTTCGGTGATGGACACGTGTCGAGAACCCGCCCTCGCTGTGCGGGGGCGGCGGCAATGTGTGGAATTGCTTTGGTCGTTTCTGGCTGTCGCCTTGATTTGTCGTCTCTACATGTAGACGCCAGAGCTCCGTCTCCTCATCCAGTGCACGAGCATCTCGAGTTTTCGATAGATGATCTTGAAGCGGCATTGCGGAGAAGGGGCCCCGATAGCTTAGGCGGAGTGAAGGTTTTTATTTCCTCAATATCTTCTAATCCTGGTGAAGAGCAGCAGTTTGAGTGTTTTGTTGAGAGGGTTGATTGTGGAGTTGCATTTCAGAATCAGAATGATCAACACGAGATGGAAAATGGAAGGATTCTCCATTCTCATGACAGTTGTAGTAGTCTCATCTCTGGTGCGCAGTTTTATTTTCTGGGGGCTACATTACAGCTTAGAGGGCTTAACCCTATTGTTCAGCCACTGATGGATGCTTCCCGCAATGTTCTTGTTTACAATGGTGAAATATTTGGAGGAATACACGTTGAGTATCATCAAAATGATGCTGAAGCTCTTATGCAAGCTCTTGGGAATTGTTGCGCAAGCAATGTTAGTTTAGATACGAACACATGTTTAGGGGAATGTAAGAGAGAAAGCACTATTGTAGACGTTCTTTCAAACATTCAAGGGCCATGGGCAATCATCTACTTCGCGGTTAGTGCAAAAACTTTGTGGTTTGGTAGGGATGCCTTTGGTAGGCGAAGTCTTCTTGTTCACTGGCCAACCGTGGTGGATTCTCGGTTTCTTTTGTCTTCTGTATCACCAGCTTCCTCCATGTTTCACGACTCTGGACATGACAATGATAATGGTACTTGTGAAGTGAGCTTCTGGGAAGAACTTCCATGTGGGATTTACAGCATCTCTTTTGATGCTCAGAGCACAGACGGTTGCCTGGTTGGTGAAGTCAAAAGGCATGAATGGACCAATGAGTCACTGAAAGAACTTGTCGAGTGGAAGAGAACTTGTATTGTACCTAAACCTGGAGACATCTCCTCTTCATATCACGAGGATCTTTTGTCACAGCATGAAAGTAATTCAGCATGTTTGCATAACTTGCAATCAGTACCAGAGGGTATCCGAGCTCCTGTTTCAACACCTGCGGAGATTCTGCTGGATGCTCTAAGGAAGTCTCTTATCAGGCGTACTTCACTTTATACAATTTTCCAGGGTACAACATCTGCTTCCAGAAAAGCAGAACTTGGTCCTGTGGCCATTCTTTTTTCCGGTGGATTGGATTCTATGACACTAGCAGCATTACTGGATGAGTGCCTTGATGCCTGTTATGAGATAGATCTTCTTAATGTCAGCTTTGATGGATGTTCTGCACCTGACCGAATCTCAGCGAAGGCTGGAGTACAGGAACTGACAAGAATTGCCCCTCTAAGAAGGTGGAAGCTGGTTGAGATTGATGCTGATTTGTCAAATTTGACCTCCGAAACCAAGCATGTCATGTCTCTAATAAATCCTGCAAATACATACATGGACCTGAATATTGGAATAGCTTTGTGGCTGGCCTCTGGTGGCGATGGTTGGATTTATGAATCAATCGACAAGGATGATAAGTTTCATCGACGTGTAAAATATAAGTCTCAGGCCAAGATTCTCCTTGTTGGTTCTGGTGCCGATGAGCAATGTGCTGGTTATGGTAGGCATCGAACAAAATATAGACAAGGGGGCTGGCATCTTTTAAATGAGGAAATGAAGTTGGATATTCAGAGAATCTGGAAGAGAAATCTTGGGAGAGATGACAGATGTATTGCAGATAATGGGAAGGAGGCTAGATTTCCCTTTCTGGATGAAGACGTTATACATACATTGCTAGCGTTTCCTCTATGGGAGGTTACCGACCTCGAGAAACCTGCTGGAACCGGTGATAAGAAGATACTTAGGGAGGTTGCGAAATTACTTGGTCTGCACGAAGCAGGAGCTCTACCTAAAAGAGCAATACAGTTTGGCTCAAGGATTGCGAGGGAATCAAACCGCAAGAACTTCGGAAGCAACCGGGCTGCTAATCAGGCCTCAGCAGGAAGTGTGAAGTTCAACAAGCATTCTGTTCTTCAGTGA 2100 45.0 MFGDGHVSRTRPRCAGAAAMCGIALVVSGCRLDLSSLHVDARAPSPHPVHEHLEFSIDDLEAALRRRGPDSLGGVKVFISSISSNPGEEQQFECFVERVDCGVAFQNQNDQHEMENGRILHSHDSCSSLISGAQFYFLGATLQLRGLNPIVQPLMDASRNVLVYNGEIFGGIHVEYHQNDAEALMQALGNCCASNVSLDTNTCLGECKRESTIVDVLSNIQGPWAIIYFAVSAKTLWFGRDAFGRRSLLVHWPTVVDSRFLLSSVSPASSMFHDSGHDNDNGTCEVSFWEELPCGIYSISFDAQSTDGCLVGEVKRHEWTNESLKELVEWKRTCIVPKPGDISSSYHEDLLSQHESNSACLHNLQSVPEGIRAPVSTPAEILLDALRKSLIRRTSLYTIFQGTTSASRKAELGPVAILFSGGLDSMTLAALLDECLDACYEIDLLNVSFDGCSAPDRISAKAGVQELTRIAPLRRWKLVEIDADLSNLTSETKHVMSLINPANTYMDLNIGIALWLASGGDGWIYESIDKDDKFHRRVKYKSQAKILLVGSGADEQCAGYGRHRTKYRQGGWHLLNEEMKLDIQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIHTLLAFPLWEVTDLEKPAGTGDKKILREVAKLLGLHEAGALPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVKFNKHSVLQ 699
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8562198 8568865 + CmaCh04G017050.1 Cma04g01705 292786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01705 699 CDD Asn_Synthase_B_C 413 664 IPR001962 GO:0004066|GO:0006529
Cma04g01705 699 Pfam Glutamine amidotransferase domain 152 264 IPR017932 -
Cma04g01705 699 PANTHER ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 20 684 - -
Cma04g01705 699 Gene3D HUPs 376 697 IPR014729 -
Cma04g01705 699 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 48 284 IPR029055 -
Cma04g01705 699 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 60 268 IPR029055 -
Cma04g01705 699 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 409 686 - -
Cma04g01705 699 Pfam Asparagine synthase 535 647 IPR001962 GO:0004066|GO:0006529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01705 - - bhj:120081619 1194.1