Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01716 ATGGATCTAGAAAGTGGAGTTCTTAGTGAAAAGAATACGAAGAAAGATTCATGGAAGACGGTTCTGATGATGGCTTATCAGAGTCTTGGGGTTGTCTATGGGGAGTTGGGCACTTCGCCTCTATATGTCTATAGGAACACTTTTGCAGAAGAAGATATCGATCATACTCAGAGCAACGACGAGATTTATGGGGTTTTGTCCTTTGTTTTCTGGACTCTTACCATTGTTCCTTTGCTTAAGTACATATTTATTGTTCTTAAAGCCGATGATAATGGCGAGGGAGGGACATTTGCTCTGTATTCGTTGCTGTGTCGACACGCACGAGTTAGCTCCTTGCCCAATACCCAATTGGCTGATTCTGAACTCACTGAGTACAAGATGAATGTTCTTGGTCCGCCATCTCTGGAAAGCTTTGGATTCAAACTCAAATCCGCATTAGAAAAGCGTCGTGTTCTTCAAAAGTTCTTGCTCGTTCTTGCTTTAATTGGGACTTGCATGGTGATTGGAGATGGCATCCTAACACCGGCTATTTCTGTTCTTTCGGCTGTTTCTGGTCTCGAGCATACCATGGCGAAAGAGCATCACCAATATATAGTACTCCCGATTGCGTGCATCGTACTGATATGCTTGTTCGCTCTTCAACACTACGGCACGCACAGGATCGGGTTCTTGTTTGCTCCCATAGTGACAGTTTGGCTATTGTGTATCAGTGCCATTGGGTTGTACAATATTATTCACTGGAATCCAGGTGTTTATAGAGCAATTTCTCCTCGTTACATGTTCCAATTTCTCAAGAAAACCCAGAAAGGAGGTTGGATGTCACTTGGTGGAATAATGTTGTGCATTACTGGCTCGGAGGCGATGTTTGCTGACCTTGGGCATTTTTCACAGTTGTCAATCAAGATTGCTTTCACTTTAATGGTTTATCCGTCTCTCCTCCTTGCATACATGGGGCAAGCTGCCTATCTGTCTCAACATCATCCCTCTCCAAATGATCATCCAATTGGGTTTTACGTATCTGTACCTGATAAATTGAGGTGGCCTGTCCTTATAATTGCTGTGCTTGCTGCAGTAGTAGGAAGCCAGGCTATAATCACCGGAACGTTCTCTATTATAAAGCAGTGCTCGGCTTTGGGTTGTTTTCCTCGAGTCAAAATCATCCATACGTCCTCGAAAGTTCACGGTCAGATCTATATCCCGGAGGTTAATTGGATTCTGATGCTGTTGTGCTTGGCTGTTACCATAGGTTTCAGAGACACCAAGCGTTTGGGCCACGCCTCAGGTTTGGCAGTGATAACTGTGATGCTTGTTACTACGTGCTTGATGTCGCTTGTTATCGTTCTGTGCTGGCACCGAAGTGTATTTCTTGCTATAGGCTTCATCTTCTTTTTTGGCACCATTGAATCTCTCTACTTCTCTGCTTCTCTTACAAAGTTTCTTGAAGGAGCCTGGGTTCCCATTGCAACTTCTATTGTATTCCTCATAGTCATGTATGTCTGGCACTATGGTACTCTTAAGAAGTTTGAATTTGAGCTCCAAAACAAGGTTTCTGTCAACTGGCTGCTCGGTGTCGGTCCCAGCTTAGGCATTGTGAGAGTCCGTGGGATGGGTGTTGTACAGACCGAGCTAGTTTCAGGAATCCCGGGTATCTTCACCCACTTTGTCACCAACATTCCCGCCTTCCATCAAGTCCTTGTTTTCCTTTGCATCAAGTATGTCCCAGTGCCACACGTTAGACCAGAGGAACGGTTTCTTATTGGTCGTATCGGTATGAGTGAATACAGACTCTATAGGTGCATTGTGCGATACGGGTATCGAGATTTTCACAAAGACGACATAGAGTTTGAGAGTGATCTTCTATGCAGCATAGCAAAGTTTATAAGGTCAGGAACTGCAGAGGCAGGTGATGAAAAGATGTCAATGGTTGGGACATCATCTTCTACACACGAAGATAGAATTCAGATGGCCGTGGCCGAGACCGATAACGATGAAGACTCTGAAGACCTGTACCGAGGTTCAGATACAAGGGAAATAAGGTCACCCGGTCCAGTTGAATTGAGAAAAAGAGTGCGGTTCATGTTACCCGATAGCCCGAAAATGAACACGAATGCAATGGAAGAATTAGAAGAGCTAATGGAAGCAAGAGAAGGAGGAGTAGCTTACATATTAGGACGGTCACACATGAAAGCAAAACAAGGATCGAGCACGCTGAAAAGGGTGTCGATCGACTTCGTTTACGAGTTCTTGAGGAAGAACAGCAGAGAAGCTGAGTTCCCTGTAGGTTTATCGCATTCATCATCAACCCTTGAGGTGGGCATGATGTATCTTGTTTAG 2334 44.52 MDLESGVLSEKNTKKDSWKTVLMMAYQSLGVVYGELGTSPLYVYRNTFAEEDIDHTQSNDEIYGVLSFVFWTLTIVPLLKYIFIVLKADDNGEGGTFALYSLLCRHARVSSLPNTQLADSELTEYKMNVLGPPSLESFGFKLKSALEKRRVLQKFLLVLALIGTCMVIGDGILTPAISVLSAVSGLEHTMAKEHHQYIVLPIACIVLICLFALQHYGTHRIGFLFAPIVTVWLLCISAIGLYNIIHWNPGVYRAISPRYMFQFLKKTQKGGWMSLGGIMLCITGSEAMFADLGHFSQLSIKIAFTLMVYPSLLLAYMGQAAYLSQHHPSPNDHPIGFYVSVPDKLRWPVLIIAVLAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKVHGQIYIPEVNWILMLLCLAVTIGFRDTKRLGHASGLAVITVMLVTTCLMSLVIVLCWHRSVFLAIGFIFFFGTIESLYFSASLTKFLEGAWVPIATSIVFLIVMYVWHYGTLKKFEFELQNKVSVNWLLGVGPSLGIVRVRGMGVVQTELVSGIPGIFTHFVTNIPAFHQVLVFLCIKYVPVPHVRPEERFLIGRIGMSEYRLYRCIVRYGYRDFHKDDIEFESDLLCSIAKFIRSGTAEAGDEKMSMVGTSSSTHEDRIQMAVAETDNDEDSEDLYRGSDTREIRSPGPVELRKRVRFMLPDSPKMNTNAMEELEELMEAREGGVAYILGRSHMKAKQGSSTLKRVSIDFVYEFLRKNSREAEFPVGLSHSSSTLEVGMMYLV 777
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8636950 8642267 - CmaCh04G017160.1 Cma04g01716 292797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01716 777 Pfam K+ potassium transporter 26 607 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma04g01716 777 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 776 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma04g01716 777 TIGRFAM kup: potassium uptake protein 24 775 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma04g01716 777 PANTHER POTASSIUM TRANSPORTER 6 1 776 - -
Cma04g01716 777 MobiDBLite consensus disorder prediction 659 680 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01716 Cma05g00002 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01716 Cma-Chr4:8636950 Cma14g00637 Cma-Chr14:3160662 0 dispersed
Cma04g00287 Cma-Chr4:1406073 Cma04g01716 Cma-Chr4:8636950 0 transposed
Cma15g00326 Cma-Chr15:1513622 Cma04g01716 Cma-Chr4:8636950 0 wgd
Cma04g01716 Cma-Chr4:8636950 Cma05g00002 Cma-Chr5:6807 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01716 K03549 - csv:101212925 1409.43