Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g01781 | ATGCTTAGAGTTGATAGAATGATGCCTAGTAATGATTTTTTCATCTGGGTTCCTCTGCTTTTCCTCTGTTCTTCTCTGTTGCTTCTTAAATCCATAAGAAAAGAGGCAAAACCCAACAACAAGCTTCTTCCTCCATCCCCTCCCAAGCTTCCTTTGTTGGGCCATTTGCACCTCCTTGGCTCCCTCCCTCATCGCTCTCTCTCTCAGCTTTCAAAAAAATATGGCCCCGTCATGCTCCTCCAACTCGGCTCTGTCCCAACCATCGTTATCTCCTCTGCCGCCGCTGCAAAAGAGTTGTTTAAGTTCCACGATCTTGCTTCTTGCAGCCGCCCTCGCTTAACGGGTAGTGGAAGACTTTCATACAACTTCTTGGATCTAAATCTATCACCGTACGGTGAACGTTGGAGGGAACTACGGAAGATTTGTACGCTTCAGCTCTTCACTGCTCGGCGGGTTCAATCTTTTTGGGAAATTAGAGAAGAGGAAGTGGGGCGCCTTGTAAACTCCATCGCTCAATCCTCTTCTTCTTCATCTCCAATTGATCTGAGTGACAAATTGTATTCTCTCACTGCAAATATAACAACAAGAGTTGCTTTTGGCAGCATCTTCAGCGGGGGAAAGCTAGATGATGAATACTTTCAACATGTTATCAGGAGAGCAGTTGCAGCAATTGGAAGCTTCTCGATGACCGATTTCATTCCTACTTTCGGTTGGATTATTGATCGGTTAAATGGTGTTCATGGGAGGCTGGAGAAGAGCTTTGCTGAAATGGATGCCTTTTTTCAACATATAGTCGACGATCGTAGAAACTTCAAGAAGACGTCTAAGAATGAAGAAAACATTGTTGATGTTTTGTTGAGAATGGAAAGGGAAAGCTCTGAAGTAACCCAAGATTGCATCAAAGCACTTATCATGGATATATTTCTAGCGGGAGTAGAAACAGGGGCAACCACCATTGTTTGGACGATGACAGAGCTAGTTAGGAACCCAAGAGTGATGAAGAAACTCCAAGACGAGATTAGAAGTTGCATAAAAGAAGATTTAGTGAAAGAGATCGACTTGGAAAAACTTGAGTATCTAAAAATGGTAGTGAAAGAGACATTCAGATTGCATCCACCGATCCCACTTCTACTTCCAAGAGAAACCATATCCCCTTTGAAGCTCAACGGTTACGATGTCGATTCCAAGGTTCATCTTCACATCAATGTTTGGGCTATCGGACGAGATCCACAATCTTGGACTGACCCAGAAGAGTTCTTTCCCGAGAGGTTTATAGGAAGCAATATCGATTATAAAGGACAGAACTTCGAGTTAATACCTTTTGGAAGCGGGCGAAGAATTTGCCTTGGGATGAATATGGCAACCCTTACGGTGGAGTTGGCACTGGCTAACTTGTTGCTGTCCTTTGATTGGAAACTGCCCAATGGAATGAAAGAAGAAGATGTTGATATGGAAGAGGTCGATGGTCTTTCGGCTGCCAAGAAATCACCCCTTAGGCTTATTCCAGTCCCCTACTTTTAG | 1521 | 43.79 | MLRVDRMMPSNDFFIWVPLLFLCSSLLLLKSIRKEAKPNNKLLPPSPPKLPLLGHLHLLGSLPHRSLSQLSKKYGPVMLLQLGSVPTIVISSAAAAKELFKFHDLASCSRPRLTGSGRLSYNFLDLNLSPYGERWRELRKICTLQLFTARRVQSFWEIREEEVGRLVNSIAQSSSSSSPIDLSDKLYSLTANITTRVAFGSIFSGGKLDDEYFQHVIRRAVAAIGSFSMTDFIPTFGWIIDRLNGVHGRLEKSFAEMDAFFQHIVDDRRNFKKTSKNEENIVDVLLRMERESSEVTQDCIKALIMDIFLAGVETGATTIVWTMTELVRNPRVMKKLQDEIRSCIKEDLVKEIDLEKLEYLKMVVKETFRLHPPIPLLLPRETISPLKLNGYDVDSKVHLHINVWAIGRDPQSWTDPEEFFPERFIGSNIDYKGQNFELIPFGSGRRICLGMNMATLTVELALANLLLSFDWKLPNGMKEEDVDMEEVDGLSAAKKSPLRLIPVPYF | 506 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 8976316 | 8978222 | - | CmaCh04G017810.1 | Cma04g01781 | 292862 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g01781 | 506 | Pfam | Cytochrome P450 | 44 | 489 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01781 | 506 | PANTHER | CYTOCHROME P450 71B16-RELATED | 15 | 504 | - | - | |
Cma04g01781 | 506 | PANTHER | CYTOCHROME P450 71B11-RELATED | 15 | 504 | - | - | |
Cma04g01781 | 506 | Gene3D | Cytochrome P450 | 28 | 500 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01781 | 506 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 441 | 450 | IPR017972 | GO:0005506|GO:0016705 | |
Cma04g01781 | 506 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01781 | 506 | PRINTS | P450 superfamily signature | 362 | 373 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01781 | 506 | PRINTS | P450 superfamily signature | 439 | 448 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01781 | 506 | PRINTS | P450 superfamily signature | 448 | 459 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01781 | 506 | PRINTS | E-class P450 group I signature | 71 | 90 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01781 | 506 | PRINTS | E-class P450 group I signature | 189 | 207 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01781 | 506 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01781 | 506 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01781 | 506 | PRINTS | E-class P450 group I signature | 361 | 379 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01781 | 506 | PRINTS | E-class P450 group I signature | 402 | 426 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01781 | 506 | PRINTS | E-class P450 group I signature | 438 | 448 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01781 | 506 | PRINTS | E-class P450 group I signature | 448 | 471 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01781 | 506 | SUPERFAMILY | Cytochrome P450 | 44 | 504 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma04g01781 | Cma18g00748 | CCT | |
Cma04g01781 | Cma18g00748 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g01781 | Cma-Chr4:8976316 | Cma04g01787 | Cma-Chr4:9010240 | 0 | dispersed | |
Cma04g01785 | Cma-Chr4:9004468 | Cma04g01781 | Cma-Chr4:8976316 | 3.03E-70 | dispersed | |
Cma11g00199 | Cma-Chr11:1011080 | Cma04g01781 | Cma-Chr4:8976316 | 8.03E-08 | dispersed | |
Cma04g01781 | Cma-Chr4:8976316 | Cma04g01782 | Cma-Chr4:8991584 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g01781 | - | K01773 | cmos:111458142 | 799.66 |