Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01781 ATGCTTAGAGTTGATAGAATGATGCCTAGTAATGATTTTTTCATCTGGGTTCCTCTGCTTTTCCTCTGTTCTTCTCTGTTGCTTCTTAAATCCATAAGAAAAGAGGCAAAACCCAACAACAAGCTTCTTCCTCCATCCCCTCCCAAGCTTCCTTTGTTGGGCCATTTGCACCTCCTTGGCTCCCTCCCTCATCGCTCTCTCTCTCAGCTTTCAAAAAAATATGGCCCCGTCATGCTCCTCCAACTCGGCTCTGTCCCAACCATCGTTATCTCCTCTGCCGCCGCTGCAAAAGAGTTGTTTAAGTTCCACGATCTTGCTTCTTGCAGCCGCCCTCGCTTAACGGGTAGTGGAAGACTTTCATACAACTTCTTGGATCTAAATCTATCACCGTACGGTGAACGTTGGAGGGAACTACGGAAGATTTGTACGCTTCAGCTCTTCACTGCTCGGCGGGTTCAATCTTTTTGGGAAATTAGAGAAGAGGAAGTGGGGCGCCTTGTAAACTCCATCGCTCAATCCTCTTCTTCTTCATCTCCAATTGATCTGAGTGACAAATTGTATTCTCTCACTGCAAATATAACAACAAGAGTTGCTTTTGGCAGCATCTTCAGCGGGGGAAAGCTAGATGATGAATACTTTCAACATGTTATCAGGAGAGCAGTTGCAGCAATTGGAAGCTTCTCGATGACCGATTTCATTCCTACTTTCGGTTGGATTATTGATCGGTTAAATGGTGTTCATGGGAGGCTGGAGAAGAGCTTTGCTGAAATGGATGCCTTTTTTCAACATATAGTCGACGATCGTAGAAACTTCAAGAAGACGTCTAAGAATGAAGAAAACATTGTTGATGTTTTGTTGAGAATGGAAAGGGAAAGCTCTGAAGTAACCCAAGATTGCATCAAAGCACTTATCATGGATATATTTCTAGCGGGAGTAGAAACAGGGGCAACCACCATTGTTTGGACGATGACAGAGCTAGTTAGGAACCCAAGAGTGATGAAGAAACTCCAAGACGAGATTAGAAGTTGCATAAAAGAAGATTTAGTGAAAGAGATCGACTTGGAAAAACTTGAGTATCTAAAAATGGTAGTGAAAGAGACATTCAGATTGCATCCACCGATCCCACTTCTACTTCCAAGAGAAACCATATCCCCTTTGAAGCTCAACGGTTACGATGTCGATTCCAAGGTTCATCTTCACATCAATGTTTGGGCTATCGGACGAGATCCACAATCTTGGACTGACCCAGAAGAGTTCTTTCCCGAGAGGTTTATAGGAAGCAATATCGATTATAAAGGACAGAACTTCGAGTTAATACCTTTTGGAAGCGGGCGAAGAATTTGCCTTGGGATGAATATGGCAACCCTTACGGTGGAGTTGGCACTGGCTAACTTGTTGCTGTCCTTTGATTGGAAACTGCCCAATGGAATGAAAGAAGAAGATGTTGATATGGAAGAGGTCGATGGTCTTTCGGCTGCCAAGAAATCACCCCTTAGGCTTATTCCAGTCCCCTACTTTTAG 1521 43.79 MLRVDRMMPSNDFFIWVPLLFLCSSLLLLKSIRKEAKPNNKLLPPSPPKLPLLGHLHLLGSLPHRSLSQLSKKYGPVMLLQLGSVPTIVISSAAAAKELFKFHDLASCSRPRLTGSGRLSYNFLDLNLSPYGERWRELRKICTLQLFTARRVQSFWEIREEEVGRLVNSIAQSSSSSSPIDLSDKLYSLTANITTRVAFGSIFSGGKLDDEYFQHVIRRAVAAIGSFSMTDFIPTFGWIIDRLNGVHGRLEKSFAEMDAFFQHIVDDRRNFKKTSKNEENIVDVLLRMERESSEVTQDCIKALIMDIFLAGVETGATTIVWTMTELVRNPRVMKKLQDEIRSCIKEDLVKEIDLEKLEYLKMVVKETFRLHPPIPLLLPRETISPLKLNGYDVDSKVHLHINVWAIGRDPQSWTDPEEFFPERFIGSNIDYKGQNFELIPFGSGRRICLGMNMATLTVELALANLLLSFDWKLPNGMKEEDVDMEEVDGLSAAKKSPLRLIPVPYF 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8976316 8978222 - CmaCh04G017810.1 Cma04g01781 292862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01781 506 Pfam Cytochrome P450 44 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01781 506 PANTHER CYTOCHROME P450 71B16-RELATED 15 504 - -
Cma04g01781 506 PANTHER CYTOCHROME P450 71B11-RELATED 15 504 - -
Cma04g01781 506 Gene3D Cytochrome P450 28 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01781 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Cma04g01781 506 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01781 506 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01781 506 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01781 506 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01781 506 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01781 506 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01781 506 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01781 506 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01781 506 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01781 506 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01781 506 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01781 506 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01781 506 SUPERFAMILY Cytochrome P450 44 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01781 Cma18g00748 CCT
Cma04g01781 Cma18g00748 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01781 Cma-Chr4:8976316 Cma04g01787 Cma-Chr4:9010240 0 dispersed
Cma04g01785 Cma-Chr4:9004468 Cma04g01781 Cma-Chr4:8976316 3.03E-70 dispersed
Cma11g00199 Cma-Chr11:1011080 Cma04g01781 Cma-Chr4:8976316 8.03E-08 dispersed
Cma04g01781 Cma-Chr4:8976316 Cma04g01782 Cma-Chr4:8991584 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01781 - K01773 cmos:111458142 799.66