Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01782 ATGCTTAGCGTTGAGAGAATGATGTCTAATAATCTCTTTATCTGGGTTCCTCTGCTTTTCCTCTGTTCTTCTCTGTTGCTTCTTAAATCCATAAGAAAACAGGCAAACCCCAACAACAAGCTTCTTCCTCCAACCCCTCCCAAGCTTCCTTTGTTGGGCCATTTTCACCTCATTGGCTCCCTCCCCCATCGCTCTCTCTCTCAGCTTTCAAAAAAATATGGTCCCGTCATGCTCCTCCAACTCGGCTCTGTCCCAACCATTGTGATCTCCTCTGCCGCCGCTGCAAGAGAGTTGTTCAAATTTCACGACCTTGCTTCTTGCAGTCGACCTCTCTTACACGCCAACGGAAGACTTTCGTACAACTATCTTGACATGAGTCTCACTCCATACGGTGAACACTGGAGGAACGTCCGAAAGATTTGTATGCTTGAGCTCTTCACTGCTCGTCGGGTTCAATCTTTTCAGGAAATTAGAGAAGAGGAAGTGGGGCGCCTTCTAAACTCCATCTCTCAATCCGCTTCTTCTTCAGCTCCAATTGATATGAGTGACAAATCCTATTCTCTCACTGCAAATATAATAACAAGAGTTGCTTTTGGCAGCATCTTCAGCGGAGGAAAACTAGATGATGAACACTTTCAACATGTTATCCGGAGAGCAGTTGCAGCAATTGGAAGCTTCTCGATGACCGATTTCTTTCCTACTTTCGGTTGGATTATTGATAGGTTAAATGGTGGTCATGGGAGGCTGGAGAAGAGCTTTGGTGTGCTGGATGCCTTTTTTCAACATGTAGTCGACGATCGTATCAACTTCAAGAAGACTTCTAAGAACGAAGAAAACATTGTTGATGTTTTGTTGAGAATGGAAAGGGAAAGCTCTGAATCTGATGCAATAAAAGTCACCCGAGATTGCATTAAAGCACTCATCAAGGATATCTTCATGGCGGGAGTTGAAACAGGAGCCGACACTATTGTTTGGGCCATGACAGAGCTGATTAGGAACCCAAGGGTGATGAAGAAGCTCCAAGACAAGATCAGAAGTTGCATAAAAGAAGATTTAGTGAAAGAGGACGACCTAGAAAAGTTTGAGTATCTAAAAATGGTAGTGAAAGAGGTTCTGAGATTGCATCCACCGGCTCCTCTTCTGCTTACAAGAGAAACCATCTCCCCTTTTAAGCTTAATGGTTACGATATCGAACCCAAGACTCATCTTCACATTAATGTGTGGGCCATCGGACGAGACCCACAATCTTGGACTAACCCAGAAGAATTCTTTCCCGAGAGGTTTATAGGAAGCAATATCGATTATAAAGGACAGAACTTTGAGTTATTACCTTTCGGAGGCGGTCGAAGAATATGTCCTGGGATGAACATGGCTACCCTTACGGTGGAGTTGGCACTGGCTAACCTGTTGTGGTGCTTTGATTGGAAACTTCCCGATGGAATGAAGGAAGAAGATGTAGACATGGAAGAGGAGGTTGGTCTTACGATTGCCAAGAAATCACTCCTTAAGCTAATTCCAGTCCTTTCAACTAATTTTTAG 1539 43.99 MLSVERMMSNNLFIWVPLLFLCSSLLLLKSIRKQANPNNKLLPPTPPKLPLLGHFHLIGSLPHRSLSQLSKKYGPVMLLQLGSVPTIVISSAAAARELFKFHDLASCSRPLLHANGRLSYNYLDMSLTPYGEHWRNVRKICMLELFTARRVQSFQEIREEEVGRLLNSISQSASSSAPIDMSDKSYSLTANIITRVAFGSIFSGGKLDDEHFQHVIRRAVAAIGSFSMTDFFPTFGWIIDRLNGGHGRLEKSFGVLDAFFQHVVDDRINFKKTSKNEENIVDVLLRMERESSESDAIKVTRDCIKALIKDIFMAGVETGADTIVWAMTELIRNPRVMKKLQDKIRSCIKEDLVKEDDLEKFEYLKMVVKEVLRLHPPAPLLLTRETISPFKLNGYDIEPKTHLHINVWAIGRDPQSWTNPEEFFPERFIGSNIDYKGQNFELLPFGGGRRICPGMNMATLTVELALANLLWCFDWKLPDGMKEEDVDMEEEVGLTIAKKSLLKLIPVLSTNF 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8991584 8993198 - CmaCh04G017820.1 Cma04g01782 292863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01782 512 Pfam Cytochrome P450 43 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01782 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Cma04g01782 512 PANTHER CYTOCHROME P450 71B16-RELATED 13 509 - -
Cma04g01782 512 SUPERFAMILY Cytochrome P450 43 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01782 512 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01782 512 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01782 512 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01782 512 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01782 512 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01782 512 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01782 512 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01782 512 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01782 512 PANTHER CYTOCHROME P450 71B11-RELATED 13 509 - -
Cma04g01782 512 Gene3D Cytochrome P450 27 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01782 512 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01782 512 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01782 512 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g01782 512 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01782 Cma18g00746 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01782 Cma-Chr4:8991584 Cma04g01787 Cma-Chr4:9010240 0 dispersed
Cma04g01786 Cma-Chr4:9005061 Cma04g01782 Cma-Chr4:8991584 1.18E-95 dispersed
Cma04g01782 Cma-Chr4:8991584 Cma04g01784 Cma-Chr4:9003972 1.09E-57 proximal
Cma04g01781 Cma-Chr4:8976316 Cma04g01782 Cma-Chr4:8991584 0 tandem
Cma18g00747 Cma-Chr18:6709254 Cma04g01782 Cma-Chr4:8991584 5.34E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01782 - K01773 cmos:111458142 815.453