Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01783 ATGGAGGGTTTTGGCAGGCTTTTTGGATTGGCTAAGCCTTATTTGGTGGTCGTTTTTGTGCAGTTTGGTTATGCTGGAATGACGATTCTTGCTAAGTCTGCCTTGGACAAAGGGATGAGCCCACATGTTTTCGTCGTTTATCGTCATGCCGTTGCTACTCTTGTCATTGCTCCTTTTGCCTTTATCTTTGACAGGAAGGCGAGGACGAAGATGACTTTTTCGATATTCTGGAAGATTGTGTTGCTGGGTTTATTGGAGCCGGTGATCGATCAGAACTTGTACTTTACTGGTATGAAGCTCACAACAGCAACGTTTACAGCAGCCATGTGCAATATTCTACCAGCTTTCTCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAATATTTTGAAAAGGGGAAGCCAAGCAAAGATGATAGGAACCATAGTGACAGTTGGAGGAGCCATGATTATGACCTTCATAAGAGGGCCAATGTTGAATCTGCCATGGACAAGAGCCAACCAGCACTCAGCTTCTTCAGCTGGTTCTGCTAATCACCAAAGCCCACTCAAGGGCTCACTCATGATAGCTACTGGCTGCATTTGTTGGTCAGCTTTCATCACTCTTCAGGCGATTACATTAAAAGAGTACCCGGTGGAGTTGTCGCTTACTGCATTGATATGCTTGGTGGGCACCATTGGAGGGTCAGGGGTGGCTTTGATCATGGAGAGGGGGAACCTTGGTGCTTGGGTTTTGCACTTAGATAGTCAGCTTCTGGCTGTTGTTTATTCTGGAGTAATATGTACAGGGGTAACTTATTATATTCAAGGAGTGGTGATGCAAACAAAAGGGCCTGTTTTTGTGACAGCATTCAGTCCTTTGAGCATGATTCTTGTTGCAATCATGAGCTCCTTCATCTTGGCTGAGATAATGTTCTTGGGCAGGATTCTTGGAGCTGTGGCCATTATCAGTGGCTTGTACTTGGTTTTGTGGGGAAAAAGCAAAGATCAAACTTCAGTTGATTCAGAGTGTGATAAGATTACCCCGTGTGAGCAACAAATGACTAGAAATGGTGAAGAATTTGTGGTGGTTGATGTTGCCAAAGAGGACACAAATTGA 1104 44.75 MEGFGRLFGLAKPYLVVVFVQFGYAGMTILAKSALDKGMSPHVFVVYRHAVATLVIAPFAFIFDRKARTKMTFSIFWKIVLLGLLEPVIDQNLYFTGMKLTTATFTAAMCNILPAFSFLMAWACRLEKVNILKRGSQAKMIGTIVTVGGAMIMTFIRGPMLNLPWTRANQHSASSAGSANHQSPLKGSLMIATGCICWSAFITLQAITLKEYPVELSLTALICLVGTIGGSGVALIMERGNLGAWVLHLDSQLLAVVYSGVICTGVTYYIQGVVMQTKGPVFVTAFSPLSMILVAIMSSFILAEIMFLGRILGAVAIISGLYLVLWGKSKDQTSVDSECDKITPCEQQMTRNGEEFVVVDVAKEDTN 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8994980 8997473 - CmaCh04G017830.1 Cma04g01783 292864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01783 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Cma04g01783 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 330 - -
Cma04g01783 367 PANTHER WAT1-RELATED PROTEIN 9 341 - -
Cma04g01783 367 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020|GO:0016021
Cma04g01783 367 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020|GO:0016021
Cma04g01783 367 PANTHER WAT1-RELATED PROTEIN 9 341 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00442 Cma-Chr3:4615905 Cma04g01783 Cma-Chr4:8994980 5.01E-150 dispersed
Cma04g00225 Cma-Chr4:1090737 Cma04g01783 Cma-Chr4:8994980 0 dispersed
Cma04g01197 Cma-Chr4:6104958 Cma04g01783 Cma-Chr4:8994980 0 dispersed
Cma04g01198 Cma-Chr4:6111240 Cma04g01783 Cma-Chr4:8994980 0 dispersed
Cma04g01783 Cma-Chr4:8994980 Cma04g02624 Cma-Chr4:17910496 3.86E-148 dispersed
Cma04g01783 Cma-Chr4:8994980 Cma04g00224 Cma-Chr4:1085071 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01783 - - cmos:111458151 712.22