Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g01787 | ATGCTTAGCGTTGATAGAATGATGTCTAATAATCTCTTTATCTGGGTTCCTCTGCTTTTCCTCTGTTCTTCTCTGTTGCTTCTTAAATCCATAAGAAAACAGGCAAAACCCAACAACAAGCTTCTTCCTCCAACCCCTCCCAAGCTTCCTTTGTTGGGCCATTTTCACCTCATTGGCTCCCTCCCCCATCGCTCTCTCTCTCAGCTTTCAAAAAAATATGGCCCCGTCATGCTCCTCCAACTCGGCTCTGTCCCAACCATCGTTATTTCCTCTGCCGCCGCTGCAAGAGAGTTGTTCAAATTTCACGACCTTGCTTCTTGCAGCCGTCCTTGCTCAACAGGTAGTGGAAGACTTTCGTACAGCTATGTTGACATGAGTTTTGCTCCATACGGTGAACACTGGAGGAACGTTCGAAAGATTTGTATGTTTGAGCTCTTCAATGCTTCGAGGGTTCAGTCGTTTCAGTATATTAGAGAAGAAGAGGTGGGTCTGTTATTGAACTCAATCTCTCAACATTCAAATCTTGTTGATCTGAGTGAGAAATCTTACTCTCTCACAGAAAATATAATAACCCGGATGGCTTTTGGGAAGAACTTCAGAGGGGGTGAGCTAGATAATCACAATTTTCACCATGTTGTTCGAAGAGCCATAGTATCACTCGGATATTTCTCCGCGACTGACTACTTTCCCAGAGTGGGTTGGATTGTTGATTGGCTTACTGGCGTTCATGGAAGGTTGGAAAAGAGCTTTTTTGAGTTGGATGCCTTTTTCCAACATGTAATTGATGACCGCATCAACTTCCAGGCAACTTCTCAGAAAAAAGACAATATTATCGACGTTCTGTTGAAATCAGAAAAAGATGGATTGCAACTCAGTGGAGATTGCATCAAGGCACTTACAATGAATATATTTCTAGGTGGAGTTGAAACGGGAGCAGGGGTCATTGTTTGGGCTATGACAGAGCTGGTTAGGAATCCAAGGGTGATGAAAAAGCTACAATATGAAATCAGAAACTGCATCAAAGAGGATGAAGTGAAGGAGAGTCAACTCGAAAAGCTTGAATATCTAAAAATGGTTGTGAAAGAGGTTTTGAGGCTGCATCCTCCCATCCCACTTCTTCCGAGAGAAACCATGTCCCATTTCAAGCTAAACGATTATGATATTGATCCCAAATGTCATCTGTATGTCAATGTTTGGGCGATTGGGAGAGACGTGAATTCCTGGAGTGACGCAGAAAAATTCTTGCCAGAGAGATTCATAGGGAGTGATATCAATTATATAGGACAACATTTTGAGTTATTACCATTTGGAGCTGGTCGGAGAAGATGTCCGGGGATGAATATGGGGATCCTTGCGGTGGAGCTCACACTAGCTAATCTGTTGCTTTGTTTTGATTGGAAATTACCGGATGGAATGAAAGAAGAAGATTTGGACATGGAAGAGAATGGTGGTCTAACCATCCCCAAGAGGTCACCTCTCAAACTTATTCCAATTCGCCACTTAAGAGTGTAG | 1512 | 42.92 | MLSVDRMMSNNLFIWVPLLFLCSSLLLLKSIRKQAKPNNKLLPPTPPKLPLLGHFHLIGSLPHRSLSQLSKKYGPVMLLQLGSVPTIVISSAAAARELFKFHDLASCSRPCSTGSGRLSYSYVDMSFAPYGEHWRNVRKICMFELFNASRVQSFQYIREEEVGLLLNSISQHSNLVDLSEKSYSLTENIITRMAFGKNFRGGELDNHNFHHVVRRAIVSLGYFSATDYFPRVGWIVDWLTGVHGRLEKSFFELDAFFQHVIDDRINFQATSQKKDNIIDVLLKSEKDGLQLSGDCIKALTMNIFLGGVETGAGVIVWAMTELVRNPRVMKKLQYEIRNCIKEDEVKESQLEKLEYLKMVVKEVLRLHPPIPLLPRETMSHFKLNDYDIDPKCHLYVNVWAIGRDVNSWSDAEKFLPERFIGSDINYIGQHFELLPFGAGRRRCPGMNMGILAVELTLANLLLCFDWKLPDGMKEEDLDMEENGGLTIPKRSPLKLIPIRHLRV | 503 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 9010240 | 9012644 | + | CmaCh04G017870.1 | Cma04g01787 | 292868 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g01787 | 503 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01787 | 503 | PRINTS | P450 superfamily signature | 434 | 443 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01787 | 503 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01787 | 503 | SUPERFAMILY | Cytochrome P450 | 43 | 498 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01787 | 503 | PANTHER | CYTOCHROME P450 71B11-RELATED | 13 | 500 | - | - | |
Cma04g01787 | 503 | PRINTS | E-class P450 group I signature | 357 | 375 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01787 | 503 | PRINTS | E-class P450 group I signature | 397 | 421 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01787 | 503 | PRINTS | E-class P450 group I signature | 443 | 466 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01787 | 503 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01787 | 503 | PRINTS | E-class P450 group I signature | 70 | 89 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01787 | 503 | PRINTS | E-class P450 group I signature | 185 | 203 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01787 | 503 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01787 | 503 | PRINTS | E-class P450 group I signature | 433 | 443 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01787 | 503 | Pfam | Cytochrome P450 | 43 | 490 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01787 | 503 | PANTHER | CYTOCHROME P450 71B16-RELATED | 13 | 500 | - | - | |
Cma04g01787 | 503 | Gene3D | Cytochrome P450 | 27 | 496 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cma04g01787 | 503 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 436 | 445 | IPR017972 | GO:0005506|GO:0016705 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma04g01787 | Cma18g00741 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g01781 | Cma-Chr4:8976316 | Cma04g01787 | Cma-Chr4:9010240 | 0 | dispersed | |
Cma04g01782 | Cma-Chr4:8991584 | Cma04g01787 | Cma-Chr4:9010240 | 0 | dispersed | |
Cma04g01784 | Cma-Chr4:9003972 | Cma04g01787 | Cma-Chr4:9010240 | 3.43E-53 | dispersed | |
Cma04g01787 | Cma-Chr4:9010240 | Cma18g00750 | Cma-Chr18:6731507 | 0 | dispersed | |
Cma18g00747 | Cma-Chr18:6709254 | Cma04g01787 | Cma-Chr4:9010240 | 2.42E-123 | dispersed | |
Cma04g01785 | Cma-Chr4:9004468 | Cma04g01787 | Cma-Chr4:9010240 | 1.82E-48 | proximal | |
Cma04g01786 | Cma-Chr4:9005061 | Cma04g01787 | Cma-Chr4:9010240 | 1.53E-80 | tandem | |
Cma18g00737 | Cma-Chr18:6654457 | Cma04g01787 | Cma-Chr4:9010240 | 1.16E-47 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g01787 | - | K01773 | cmos:111458142 | 703.36 |