Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g01913 ATGGAGCAAGAAGATCGGATTGAAGAAGATTGCTCCAGGTTGCTGCGGAGGAATAGCGTTACTGGTAGTAGTAACGATTACAGGTGGGTTGATGGCAGTGAAGTGGACTCCGAGTCGCCTCCATGGTCGCTGTTTGAAGAAAGAGAAAGCGGAGATGGATATGGATCTATGAGAAGGAGATTGGTTAAGAAGCCCAAGAGAGTCGATTCTTTTGATGTTGAAGCTATGGAGATTGCCGGTGCCAACTATCACCATTTAAAGGATGCTTCCATTTGGCAAACTATTGCTATAGCATTTCAAACACTTGGTGTTGTATATGGTGACATGGGTACAAGTCCATTATACGTCTTTGCTGATGTATTCAGCAAGGTGCATATTGAGGCAGATGTTGACGTCCTGGGGGCTCTATCCTTGGTGATTTACACAATTGCTCTTATTCCGTTGGCAAAATACGTTTTTGTAGTGCTCAAAGCCAACGACAATGGTGAAGGAGGAACATTTGCATTGTATTCACTGATTTGTAGGTACGCCAAAGTTAACATGCTGCCAAACCGTCAGCCAGCTGATGAACATATCTCAAGTTTTAAGCTCAAACTACCAACTCCAGAGTTGGAAAGGGCCTTAAATATCAAAGAAACTCTCGAGAAGAGATCATCCTTGAAAACTCTTATATTGCTGCTGGTTCTGATGGGCACTTCAATGATTATTGGGGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCTGTGAGTGGTCTGCAGGGACAGATAAAGTCATTCGATACAAATGCTGTGGTCGTTGTTTCAATTATAATCCTTGTGGCCTTGTTCAGCATACAGAAATTTGGGACGGGGAAAGTAGGATTTATGTTTGCTCCTGTGCTTGCTTTGTGGTTTTTTAGCCTGGGATCTATTGGAATTTACAATTTAGTGAAGTATGATCTCACCGTTATAAGGGCTCTCAATCCCGCTTACATCTATTTATTCTTCAAGAAAAATTCAAATAACGCATGGTCAGCTCTTGGTGGTTGTGTTTTGTGCGTAACAGGAGCTGAAGCAATGTTTGCTGATCTAGGCCATTTCACTGTGCCAGCCATACAGATTGCCTTCACTTGTGTTGTTTTCCCCTGCCTTCTCTTGGCGTACATGGGTCAGGCTGCATATCTCATGAAACATCCAGATTCTGCAGAAAGAATATTTTATGATTCTGTGCCAGCAAGTCTTTTTTGGCCAGTCTTTGTGACAGCAGCACTTGCTGCTATGATTGCGAGCCAAGCAATGATATCTGCAACCTTTTCTTGTGTCAAACAATCTATGGCTCTTGGATGTTTTCCGAGAATGAAGATAATTCACACATCTAAGAGACGAATGGGTCAAATTTACATCCCTATGATCAATTGGTTTTTGATGATAATGTGCATACTTGTTGTTGCAATATTTCGAAGGACTACAGACATCGCCAATGCTTATGGTATTGCTGAAGTTGGTGTGATGCTGGTGAGTACTGCTCTGGTGACCCTAGTAATGCTTCTGATCTGGCAGACAAATTTGTTTCTTGCGTTATGTTTCCCACTTGTATTTGGATCAGTGGAACTTATCTACTTATCTGCAGTTTTATCAAAAATCAGAGAAGGTGGGTGGTTGCCACTTGCTTTTGCTTCCGTTTTCCTCTCTGTGATGTACATATGGAACTATGGGAGTGTGTTGAAGTATCAAAGTGAGGTGAGAGAGAAGATATCAACGGATTTCTTGTTTGAACTGGGATCTACCCTCGGAACTGTAAGAGTTCCAGGAATTGGTCTCCTCTACAACGAGCTTGTCCAAGGCATTCCAGCAATTTTTGGGCAATTTCTTCTCACCCTTCCAGCCATCCACTCCACAATTGTGTTCGTGTGTATTAAATATGTTCCAATACCCGTGGTTCCGCAAGAGGAAAGATTTTTGTTCAGAAGGGTTGGTCCAAAAGACTACCATATATTTCGTTGCATCGCGAGATATGGCTACAAGGATGTGCGGAAGGAAGATCACCATGCATTTGAGCAGCTTCTGATGGAAAGCCTCGAGAAGTTCTTAAGAAAGGAGTCTGGCGAACTTGCCCTGGAGAGCAATTTGAATGAGCTGGAATTTGATAATATTTCAGAGAGGTTGAGGGATTCTTCTCCAACCCCAGGTGGCATTGATGTGAATGAGGAGCTGAGAATTCCATTGATGGAAGAGGCAAGAACTACAAGCTCCGAAGAATCTCTTGGGGCGCGGTTGCCATCCAGCATCATGGCATCGGGTGACGACCCTAGTTTGGAGTATGAGCTATCAGCCCTTAGGGAAGCCATGGATTCAGGATTTACATATCTACTGGCACAAGGGGATGTCCGAGCAAAGAAAAACTCATTTTTTATTAAGAAGCTTGTTATAAACTATTTCTATGCGTTCCTAAGGAGGAACTGCAGGGGCGGTGCAGCAACAATGCGAGTTCCTCACATGAACATCATGCAAGTTGGGATGACTTACATGGTTTGA 2520 43.1 MEQEDRIEEDCSRLLRRNSVTGSSNDYRWVDGSEVDSESPPWSLFEERESGDGYGSMRRRLVKKPKRVDSFDVEAMEIAGANYHHLKDASIWQTIAIAFQTLGVVYGDMGTSPLYVFADVFSKVHIEADVDVLGALSLVIYTIALIPLAKYVFVVLKANDNGEGGTFALYSLICRYAKVNMLPNRQPADEHISSFKLKLPTPELERALNIKETLEKRSSLKTLILLLVLMGTSMIIGDGILTPAISVMSAVSGLQGQIKSFDTNAVVVVSIIILVALFSIQKFGTGKVGFMFAPVLALWFFSLGSIGIYNLVKYDLTVIRALNPAYIYLFFKKNSNNAWSALGGCVLCVTGAEAMFADLGHFTVPAIQIAFTCVVFPCLLLAYMGQAAYLMKHPDSAERIFYDSVPASLFWPVFVTAALAAMIASQAMISATFSCVKQSMALGCFPRMKIIHTSKRRMGQIYIPMINWFLMIMCILVVAIFRRTTDIANAYGIAEVGVMLVSTALVTLVMLLIWQTNLFLALCFPLVFGSVELIYLSAVLSKIREGGWLPLAFASVFLSVMYIWNYGSVLKYQSEVREKISTDFLFELGSTLGTVRVPGIGLLYNELVQGIPAIFGQFLLTLPAIHSTIVFVCIKYVPIPVVPQEERFLFRRVGPKDYHIFRCIARYGYKDVRKEDHHAFEQLLMESLEKFLRKESGELALESNLNELEFDNISERLRDSSPTPGGIDVNEELRIPLMEEARTTSSEESLGARLPSSIMASGDDPSLEYELSALREAMDSGFTYLLAQGDVRAKKNSFFIKKLVINYFYAFLRRNCRGGAATMRVPHMNIMQVGMTYMV 839
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10149523 10155641 + CmaCh04G019130.1 Cma04g01913 292994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g01913 839 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 839 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma04g01913 839 TIGRFAM kup: potassium uptake protein 97 839 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma04g01913 839 Pfam K+ potassium transporter 98 671 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma04g01913 839 PANTHER POTASSIUM TRANSPORTER 12-RELATED 15 839 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01913 Cma-Chr4:10149523 Cma16g00254 Cma-Chr16:1185501 0 dispersed
Cma17g01109 Cma-Chr17:7776646 Cma04g01913 Cma-Chr4:10149523 6.08E-11 dispersed
Cma17g01110 Cma-Chr17:7779664 Cma04g01913 Cma-Chr4:10149523 0 dispersed
Cma04g01913 Cma-Chr4:10149523 Cma04g00394 Cma-Chr4:1995766 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g01913 K03549 - csv:101202804 1481.08