Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g02000 ATGATATCTTCTTCTTCTTCTTCTTCCACCATCTCCGCCTCTGCAGACACAATGTTACTCAAAGAAGATTGTAATAAGGAAGGAAAGAAACATTCCTTTCTTTTCCGGCGGACAAGTCAAGCCACCGCCGCCAGCAACCTCAACCGGCAGCGCTATTCATTGTGCCACAATGTTGGGGATGCTGTGGCCGTGACCTTTCAGGCGGTGCGCTTATGTTTCAAAATTCTGCGATACCTTTGGGTAGGGTATGAATGGATGGCAAGATTTGTATCCCTTGGATGTTATGCTGTGCTTATTTTCCCTGGTGTTCTTCAAGTTGCATATTATTATGTTTACTCCAACCAGGTTCGACGAAGCATAAAGTACGGTGATCAGCCAAGAAATAGCTTGGATCTATATGTACCACAATCTAGGGATGGCCAAAACCCAGACCCAAAGCCAGTGGTTGCATTGGTAACAGGTGGAGCCTGGATTATTGGTTATAAAGCATGGGGTTCCCTTCTTGGATCCCACTTATGTGATCGAGACATTATAGTAGCATGCCTTGATTACAGAAATTTTCCTCAAGGTAGCATGAGTGATATGATCAAGGATGCTTCTCAAGGCATCTCATTCGTATTCAATAATATTGCCGAGTATGGAGGAGATCCTAACAGGATTTTTGTGATGGGACAGTCAGCTGGTGCACATATTGGTGCTTGCACAATTGTAGAGCAGGCAATGAAAGAAGGTGGTGGTGAGAGGGTGTCTTGGAGTGTGTCCAACATAAAAGCTTTCTTTGGTTTATCAGGAGTGTACAATTTGTACAATTTAAAGGACTACTTTCACAGTCGAGGTCTTCACAGATCTATCTTTTTAAGCATCATGGAAGGAGAAGAGTCGTTGGAAAGATTTTCCCCCGAAGTTATGGTGCAGGACCCAAAGATTAAAGATGCAGCTTCCCTGCTCCCACCCTTCACTCTATTCCATGGAACTGCAGATTATTCCATACCATCACATGCCAGTAAGAGCTTCGCAGAAGTGCTTGAAAGAGTTGGAGTAAAAGTTGAAGCAGTTGAATACACAGGAAAGACGCATACGGATTTGTTTGTTCAGGATCCAATGAGAGGTGGTAAACATCAGTTGGTTGAAGATTTGATTTTCATCATTCATCAAAATGATACAGAAGCTCTCGCCAGAAATGCAATGGCTCCCCGAAGAAGACGCCTAGTACCTGAGTTCATGTTGAAGTTAGCTCAGCGTGTTAGCCCATTCTGA 1257 43.68 MISSSSSSSTISASADTMLLKEDCNKEGKKHSFLFRRTSQATAASNLNRQRYSLCHNVGDAVAVTFQAVRLCFKILRYLWVGYEWMARFVSLGCYAVLIFPGVLQVAYYYVYSNQVRRSIKYGDQPRNSLDLYVPQSRDGQNPDPKPVVALVTGGAWIIGYKAWGSLLGSHLCDRDIIVACLDYRNFPQGSMSDMIKDASQGISFVFNNIAEYGGDPNRIFVMGQSAGAHIGACTIVEQAMKEGGGERVSWSVSNIKAFFGLSGVYNLYNLKDYFHSRGLHRSIFLSIMEGEESLERFSPEVMVQDPKIKDAASLLPPFTLFHGTADYSIPSHASKSFAEVLERVGVKVEAVEYTGKTHTDLFVQDPMRGGKHQLVEDLIFIIHQNDTEALARNAMAPRRRRLVPEFMLKLAQRVSPF 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12164315 12171479 - CmaCh04G020000.1 Cma04g02000 293081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g02000 418 Pfam BD-FAE 130 342 - -
Cma04g02000 418 PANTHER ARYLACETAMIDE DEACETYLASE 45 407 - -
Cma04g02000 418 Gene3D alpha/beta hydrolase 107 368 IPR029058 -
Cma04g02000 418 SUPERFAMILY alpha/beta-Hydrolases 108 368 IPR029058 -
Cma04g02000 418 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 45 407 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01549 Cma-Chr4:7844403 Cma04g02000 Cma-Chr4:12164315 4.58E-179 dispersed
Cma04g02000 Cma-Chr4:12164315 Cma14g00800 Cma-Chr14:4052106 7.17E-156 dispersed
Cma04g02000 Cma-Chr4:12164315 Cma01g00392 Cma-Chr1:1973492 2.65E-156 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g02000 K15889 - csv:101213470 577.785