Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g02008 | ATGGCTGGAAAAGCTCAAATCCCCACCAAAAATTCAGCGCTTATTTCTATGATTGCTGATGAGGATACGGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAATGTTGACCTGCGAAGAAAAACTAATTACCTTATAGTGGACTCTAAGACAACTGTGAAACAAATTGAAGATGCTTTCAAAGAGTTTACAACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATATGTTGCAAACATGATCAGGTTTCTGGTAGATAGCTATAACAAGCCAATTCCTGCAATATTGGAGATTCCTTCCAAGGATCACCCATATGACCCGGCACACGATTCAATTCTTTCCCGAGTAAAGAATCTGTTTTCTACTGAATCGGTGGCATCTGGGAGGCGTTAA | 393 | 40.2 | MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFSTESVASGRR | 130 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 12516510 | 12520759 | - | CmaCh04G020080.1 | Cma04g02008 | 293089 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g02008 | 130 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT F | 1 | 130 | - | - | |
Cma04g02008 | 130 | Gene3D | ATPase, V1 complex, subunit F | 9 | 122 | IPR036906 | GO:0034220 | |
Cma04g02008 | 130 | TIGRFAM | V_ATP_synt_F: V-type ATPase, F subunit | 11 | 124 | IPR005772 | GO:0033180|GO:0046961|GO:1902600 | |
Cma04g02008 | 130 | SUPERFAMILY | AtpF-like | 15 | 118 | IPR036906 | GO:0034220 | |
Cma04g02008 | 130 | Pfam | ATP synthase (F/14-kDa) subunit | 15 | 116 | IPR008218 | GO:0034220|GO:0046961 | |
Cma04g02008 | 130 | PANTHER | VACUOLAR ATP SYNTHASE SUBUNIT F | 1 | 130 | - | - | |
Cma04g02008 | 130 | PIRSF | V-ATP_synth_F | 3 | 123 | IPR005772 | GO:0033180|GO:0046961|GO:1902600 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g02008 | Cma-Chr4:12516510 | Cma10g01123 | Cma-Chr10:7718173 | 9.62E-94 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g02008 | K02151 | - | csv:101215239 | 251.521 |