Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g02122 | ATGGAACACTTCTTGGGTCTTCTCCGAATTCGGGTGCTTCGCGGTTCTAATCTGGCTGTTCGTGATACTCGTAGCAGTGATCCTTTTGTCGTCGTCACTATGGGCGATAAGAGTTTGAAGACCCGTGTGGTGAAAAATAATTGCAATCCTGAATGGAATGATGAACTGACTCTTTCTATTGCAGATCTTAGAACTCCAATCGGTTTATCAGTGTATGACAAAGACACAGTAACAGACCATGACAAAATGGGAGATGCCGTAATTGACATCGAACCATACATCGAATGTCTGAAGATGGGACTGGAAAACCTCCCAGAGGGGTGTGTGGTTAAGAGGGTATATCCAAGCAGAACAAACGACTTAGCTGATGAGAGCCAATGTGTTTGGAACAAAGGGAAAATTATACAGAACATGCACCTTAGGTTGAAGAATGTAGAGTGTGGTGAGGTGGAGATTCAACTCGAATGGATCGATGTTCCGGGATCTAAGGGTCTGCCGAAAGAGGGTATGAGCCACTTCTGA | 522 | 44.64 | MEHFLGLLRIRVLRGSNLAVRDTRSSDPFVVVTMGDKSLKTRVVKNNCNPEWNDELTLSIADLRTPIGLSVYDKDTVTDHDKMGDAVIDIEPYIECLKMGLENLPEGCVVKRVYPSRTNDLADESQCVWNKGKIIQNMHLRLKNVECGEVEIQLEWIDVPGSKGLPKEGMSHF | 173 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 14870828 | 14873338 | - | CmaCh04G021220.1 | Cma04g02122 | 293203 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g02122 | 173 | ProSiteProfiles | C2 domain profile. | 1 | 106 | IPR000008 | - | |
Cma04g02122 | 173 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 163 | IPR044562 | - | |
Cma04g02122 | 173 | Gene3D | C2 domain | 4 | 169 | IPR035892 | - | |
Cma04g02122 | 173 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 158 | IPR035892 | - | |
Cma04g02122 | 173 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
Cma04g02122 | 173 | Pfam | C2 domain | 6 | 92 | IPR000008 | - | |
Cma04g02122 | 173 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 10 | 1 | 163 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g02122 | Cma-Chr4:14870828 | Cma18g00074 | Cma-Chr18:329922 | 1.81E-72 | dispersed | |
Cma04g00062 | Cma-Chr4:293140 | Cma04g02122 | Cma-Chr4:14870828 | 1.25E-78 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g02122 | - | - | csv:101204404 | 305.064 |