Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g02280 | ATGGAGAAGAACCAACCTGAGAATCCAGACCTTCTTGAGAAAACCAACGACGATGTCCCCAAATTGCTCGCTGATGATGCCATTGTTGCCGTTCCAGATGCTGTTGCTGGTGAATCCGAAGTAAAATCTGCAGATAAATTGGAGGATGATAAGGATCAGGAGGAGAAGGAGAAGGAGAAGGAGAATGAGACGGAAAAGGAGGAGGAGTTGAAGGAGAAGGATGAGTCTAAGGATGAACTGGAGCTTCATTGTGATCTCCAGACGATTCTTGAAGACGTAGATCAATTTCTGTTAACTTCTCACGGTTCTCGCGACCGAGAGGAGGATTCTGCTGTGGAGATTCCGAAGTTCATCGACAAGTTCATGGATCTCGTGGATGCCAAGATTGAGCAATACGAGAATACAGAATCGAATGCCAAGGAAAGAGAGTACCGAGTGCCGGAGGACGAATCTTCGTTTCTGGAAGCAGTTAATCGGATAGCGAAGCTCAAAAGTGCAATCCACAAAATGAAGTTGGAAGACGAGAAGAATCCGTTGATCAATCGCATCGGGAGCACTCAACAGCGATCATTTTCTTGTTTAGAAGAAGAGTTCAGGTTCTTTCTCGAGGAATCCAGAAATGGCGATTCGGATCCCGAACCGGATCGTTGTGATGATGCTGACTCCGCTCAACTCCTTTTTCCAGGTTACTCCGGCGAGATCGTGAGCTATTTGAACAAAATCGCTAACCAAATGATTGCCGGTGGATTCGAATCGGAATGTTGCCAAGTTTACATCGTAGCAAGAAGAAACATATTCGAAGATGCCTTGCAGAAGTTCGGATTCGAGAAATACAGCATTGATGATATACAGAAGATGAGTTGGGAATCAATGGAGAGGGAGATCGCTATATGGATCAAAACCATCAAGCATTGTGCCACCGTTTTGTTCTCCGGCGAACGGGATCTCGCCGAATCTGTATTTTCAGCGTATCCTCCAATCTCCGCCAGTCTGTTCAGCAATCTAACTCGCGGCATTGTGATTCAACTCCTAAATTTCTCAGAAGGAGTCACAATGACGAAACGCTCCGCCGAGAAATTGTTCAAGATGCTCGACATGTACGAAGCTCTTCGTGATCTGGTCCCAAAAATGGAAGACTTATTTCCAGAAGAATCCGCCAACGAACTCAAAACAGAGTCCACAACCGCTCGAACTCGTCTAGGCGAAGCGGCGATTTGCATATTTTGCGATCTCGAAAACTCGATCAAAGCCGACACGGGACGAACTCCGGTACCAGGCGGCGCCGTTCATCCATTGACTCGATACACCATTAACTACTTGAAATATGCGTGCGAGTACAGAAACACGCTGGAACAGATTTTCAAAGATCACGCAAAGATCGAGCGAGCAGATTCCACAAACCGACCACATTTCGAAGGCGAACAAGCACCGACTTACAACCACCCTAGCAATGACAATCAATCCCCATTCTCGACGGAACTGACGAAGGTAATGGAGCTCCTGGACTCAAATCTGGAAGCGAAATCAAAGCTGTACAGAGACATAGCACTGAGTTCGATTTTCATGATGAACAACGGGCGATACATCTTGCAGAAAATCAAAGGATCTGCAGAGATTCACGAACTGGTAGGCGATGCTTGGTACAGGAAGAGATCTTCGGAGTTACGCCAGTACCACAAGAACTACCAAAGAGAAACATGGGGAAGATTGTTGGGGTGTTTGAACCACGAGGGTTTGATGGTGCACGGGAAAGTGATAAAGCCAGTGCTGAAGGAGAAGTTCAAAGGATTCAACGCCCTGTTCGAAGAGATTCACAAGACGCAAAGCACGTGGGTGATAAGCGACGAGCAGCTTCAATCGGAGCTCCGAGTATCGATATCGGCGGTGATGATTCCGGCGTATAGGTCATTCCTAGCGAGGTTTTCGCAGTACTTGGATCCGGGGAGACAAACGGAGAAATACATTAAGCTACAGCCTGAAGACATAGAAACCTACATAGATGATCTATTCGATGGAAATGCATCCTCCATGGCAAGAAAGAGAACATAA | 2049 | 46.56 | MEKNQPENPDLLEKTNDDVPKLLADDAIVAVPDAVAGESEVKSADKLEDDKDQEEKEKEKENETEKEEELKEKDESKDELELHCDLQTILEDVDQFLLTSHGSRDREEDSAVEIPKFIDKFMDLVDAKIEQYENTESNAKEREYRVPEDESSFLEAVNRIAKLKSAIHKMKLEDEKNPLINRIGSTQQRSFSCLEEEFRFFLEESRNGDSDPEPDRCDDADSAQLLFPGYSGEIVSYLNKIANQMIAGGFESECCQVYIVARRNIFEDALQKFGFEKYSIDDIQKMSWESMEREIAIWIKTIKHCATVLFSGERDLAESVFSAYPPISASLFSNLTRGIVIQLLNFSEGVTMTKRSAEKLFKMLDMYEALRDLVPKMEDLFPEESANELKTESTTARTRLGEAAICIFCDLENSIKADTGRTPVPGGAVHPLTRYTINYLKYACEYRNTLEQIFKDHAKIERADSTNRPHFEGEQAPTYNHPSNDNQSPFSTELTKVMELLDSNLEAKSKLYRDIALSSIFMMNNGRYILQKIKGSAEIHELVGDAWYRKRSSELRQYHKNYQRETWGRLLGCLNHEGLMVHGKVIKPVLKEKFKGFNALFEEIHKTQSTWVISDEQLQSELRVSISAVMIPAYRSFLARFSQYLDPGRQTEKYIKLQPEDIETYIDDLFDGNASSMARKRT | 682 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 15904894 | 15906942 | - | CmaCh04G022800.1 | Cma04g02280 | 293361 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g02280 | 682 | MobiDBLite | consensus disorder prediction | 32 | 79 | - | - | |
Cma04g02280 | 682 | Gene3D | Exocyst complex component Exo70 | 127 | 680 | - | - | |
Cma04g02280 | 682 | Coils | Coil | 44 | 83 | - | - | |
Cma04g02280 | 682 | MobiDBLite | consensus disorder prediction | 39 | 79 | - | - | |
Cma04g02280 | 682 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 68 | 680 | IPR004140 | GO:0000145|GO:0006887 | |
Cma04g02280 | 682 | PANTHER | EXOCYST SUBUNIT EXO70 FAMILY PROTEIN | 68 | 680 | - | - | |
Cma04g02280 | 682 | Coils | Coil | 122 | 142 | - | - | |
Cma04g02280 | 682 | SUPERFAMILY | Cullin repeat-like | 147 | 671 | IPR016159 | - | |
Cma04g02280 | 682 | MobiDBLite | consensus disorder prediction | 471 | 488 | - | - | |
Cma04g02280 | 682 | Pfam | Exo70 exocyst complex subunit | 298 | 668 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 | |
Cma04g02280 | 682 | MobiDBLite | consensus disorder prediction | 464 | 488 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g02280 | Cma-Chr4:15904894 | Cma06g01676 | Cma-Chr6:10336286 | 0 | dispersed | |
Cma15g00757 | Cma-Chr15:3697182 | Cma04g02280 | Cma-Chr4:15904894 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g02280 | K07195 | - | csv:101206040 | 1054.28 |