Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g02321 | ATGGGCTCGATAGACGTCCAATCAGACAATGCCGAAGATGGATCCGCCGCCGCCGCCTCCGCCGATGGACATCTAAAGAAAGTTTCCGCCGACCCTATAAACCAGACATCTAACGAACCAGATGGAGCTACGCCTGAGAAGCCTAAAGAATTGGAGCCGACGAAGAAGCGTATGTCCTCCATGCTTCCTCTCGAGGTTGGGACCCGCGTCATGTGCCGCTGGAGAGACGGGAAGTATCATCCCGTTAAGGTCATCGAACGTCGGAAGTTGCAGGCTACTGGTTTTAGTGATTACGAATACTATGTCCACTACACCGAGTTCAATAGGAGACTTGATGAGTGGGTGAAGCTTGACCAACTTGATCTTGAATCAGTTGAGACGGTTGTTGATGAGAAAGTGGAGGACAAGGTAACAGGATTGAAGATGACCCGACACCAGAAGCGGAAGATTGATGAAACGCATGTTGAGGGCCATGAGGAACTTGATGCTGCTAGCTTGAGGGAGCATGAAGAATTTACAAAAGTTAAGAATATTGCAACAATTGAACTTGGAAGATATGAGATTGAGACATGGTATTTCTCCCCCTTTCCACCAGAATACAATGACACTACAAAGCTCTATTTTTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTCCAGAGACATATGAGGAAGTGTGATCTCAAGCATCCACCTGGTGATGAAATATATCGAAGTGGTACTTTGTCAATGTTTGAGGTTGACGGAAAAAAGAACAAGGTCTATGGGCAGAACCTCTGTTATTTAGCGAAGTTATTTCTGGACCACAAGACTCTATATTATGATGTGGACCTTTTTCTATTTTATATCCTGTGTGAGTGTGATGATCGAGGGTGTCACATGGTTGGATATTTTTCAAAGGAAAAGCATTCAGAGGAATCCTATAATTTGGCATGCATTCTCACCCTTCCTCCTTATCAAAGGAAGGGCTATGGAAAGTTCTTAATGGCTTTTTCTTATGAACTCTCCAAGAAGGAAGGTAAAGTTGGCACTCCTGAAAGACCTCTTTCTGACCTTGGGTTGGTGAGCTACAGAGGATACTGGACCAGGGTACTTCTAGACATCTTGAAAAAGCACAAGGGGAATATCTCTATCAAGGAGCTAAGCGACATGACAGCCATCAAAGCCGAAGATATTTTGAACACACTTCAGAGCCTGGAGTTGATTCAATACAGGAAAGGGCAGCATGTTATATGTGCCGACCCCAAGGTGCTGGATCGTCATCTTAAAGCTGCTGGTCGTGGGGGCCTAGAGGTCGATGTTAGCAAATTGATCTGGACTCCATACAGAGAACAAGGTTGA | 1350 | 44.96 | MGSIDVQSDNAEDGSAAAASADGHLKKVSADPINQTSNEPDGATPEKPKELEPTKKRMSSMLPLEVGTRVMCRWRDGKYHPVKVIERRKLQATGFSDYEYYVHYTEFNRRLDEWVKLDQLDLESVETVVDEKVEDKVTGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDTTKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYILCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLMAFSYELSKKEGKVGTPERPLSDLGLVSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILNTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYREQG | 449 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 16143347 | 16148613 | - | CmaCh04G023210.1 | Cma04g02321 | 293402 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g02321 | 449 | Gene3D | - | 232 | 444 | - | - | |
Cma04g02321 | 449 | Pfam | MOZ/SAS family | 234 | 411 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
Cma04g02321 | 449 | PANTHER | HISTONE ACETYLTRANSFERASE | 34 | 448 | - | - | |
Cma04g02321 | 449 | Gene3D | - | 352 | 432 | IPR036388 | - | |
Cma04g02321 | 449 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 174 | 445 | IPR016181 | - | |
Cma04g02321 | 449 | ProSiteProfiles | MYST-type histone acetyltransferase (HAT) domain profile. | 173 | 444 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
Cma04g02321 | 449 | PANTHER | HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 | 34 | 448 | - | - | |
Cma04g02321 | 449 | SUPERFAMILY | Chromo domain-like | 55 | 174 | IPR016197 | - | |
Cma04g02321 | 449 | Pfam | MYST family zinc finger domain | 175 | 229 | IPR040706 | - | |
Cma04g02321 | 449 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
Cma04g02321 | 449 | Gene3D | - | 174 | 230 | - | - | |
Cma04g02321 | 449 | CDD | NAT_SF | 285 | 343 | - | - | |
Cma04g02321 | 449 | CDD | CBD_MOF_like | 67 | 136 | - | - | |
Cma04g02321 | 449 | SMART | chromo_7 | 78 | 137 | IPR000953 | - | |
Cma04g02321 | 449 | Pfam | RNA binding activity-knot of a chromodomain | 64 | 122 | IPR025995 | - | |
Cma04g02321 | 449 | Gene3D | - | 52 | 173 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma15g00717 | Cma-Chr15:3473383 | Cma04g02321 | Cma-Chr4:16143347 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g02321 | K11308 | - | csv:101217824 | 847.81 |