Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g02418 ATGGTAACTACGGGGCCACCCACTCCTATGGGTGGTGGTGCACAGTCTGTTTCACCCTCACTTCTGCGATCTGATTCTGGATTGCTGGGAGTTCAAGGTGGTCTGCTGCCTTCACAGGCTTTTTCTTCACTCGTGTCGCCCCGCAATCAGTTCAATAGTATGAATATGCTTGGTAATATGTCCAATGTGTCATCTCTCCTTAATCAATCATTTGGAAATGGGGCTCCTAATTCTGGACTTCCATGTCCTGGTGGTGTTGACACCGGAGCAGAGCCAGACCCTCTTTCTGGTGTTGGCAATGGAATGAACTTTAATAATCCTTCATCATCTTTTGTAGCATCAAGTATGACAAACCCCGTATCGTCTGTCCAAGGGCAGAATCCACAATTTTCCAACCTTTCTAGCAGCCAGTTGTTATCAGATCAGCAGCAGTCACAACAACTTGAACCCCAGAACTTCCATCAAAGTCAACAGTCTATGGAACAGTTTTCAGCACTTCAGAGCAATCAACAATCACAATTTCAAGCAATTCGAGGGTTGTCTGGTGTTGGACCTGTAAAGTTGGAGCCTCAAGTGACCGGCAGTGATCAACATGGACAGCAGCAGCATTTGCAAACATTGAGAAGTCTTGGTTCAGTGAAATTAGAATCGCAACGACTTCATTCGATGAGAGGTTTGGCACCAGTAAAAATGGAACCCCAACAATCAGACCAGTCATTATTTCTTCAGCAGCAGCAGCATCAACAGCATCAGCATTCGCATCAACATCAACAACAGCAGCAGTTTCTGCATATGTCTAGACAGTCCTCTCAGGCAGCGGCTGCCCAAATTAATCTAATGCACCAACAAAGGCTTTTGCAATTACAACAGCAACATCAGCAACAACATCTCTTAAAAAGTATGCCTCCTCAACGGCCACAATTGCAACAACATTTACAACAGCAGAACCTTCCGCAAAGATCTCCCGTAAAACCAGGATATGAACCTGGAATGTGTGCTCGGCGTCTGACGTATTACATGTATCATCAGCAAAACAGACCTGAAGACAACAACATAGATTTCTGGAGAAAATTTGTTAACGAGTACTTTGCACCTCATGCCAAAAAGAAGTGGTGCGTTTCCATGTATGGAAGTGGGCGACAAACAACTGGAGTTTTTCCTCAGGATGCATGGCATTGTGAAATATGCAAACGCAAGCCTGGGCGTGGCTTTGAAGCAACTGCTGAAGTTCTTCCCAGGCTTTTTAAGATCAAGTATGAAAGTGGAACTATGGAGGAGCTACTTTATCTTGACATGCCCCGTGAATATCATAATGCTTCGGGTGAGATCGTCCTGGATTATGCAAAAGCAATACAGGAAAGTGTTTTTGAGCAACTTCGCGTTGTTCGGGATGGCCAACTTCGAATTGTTTTTTCTCCAGACCTTAAGATATGTTCATGGGAATTCTGTGCTCGACGCCATGAAGAACTTATTCCGAGGAGATTATTGATACCTCAGGTTAGTCATCTTGGGGCAGCAGCTCAAAAGTACCAGTCTGCCATTCAAAGCGCATCATCCAATTTATCAACTCCTGAATTGCAAAATAATTGTAACATGTTTGTGGCATCAGCACGACAATTAGCTAAAGCCTTGGAAGTTCCACTGGTAAATGACTTGGGATATACAAAGAGATATGTACGTTGTCTTCAGATATCCGAAGTGGTTAATAGCATGAAGGACTTGATTGATTACAGCAAAGAAACAGGGATCGGTCCAATGGATAGTCTAGCCAAGTTTCCTCGGAGGTCTAGTTCGTCATCAGGGCTTACAACACAAGCTCAAGGTTCTGATGAGCAGCAGCAGCAGCAACAACAACAACCATCCATAGCCCAGCGCCCAAATAATAATCAGAGTTTTGTTCAGGCTTCTGCAGTGCAGATTTCAGCTAGCAATGGTGTAACCAGTGTAAATAGCAACGCCAACCAACCTTCGACATCAAACTCAGCAAGCACCATTGTCGGGCTTCTTCACCAGAATTCTATGAACTCCAGACAGCAGAACACTATGGCTAAACCTAGTAACTCAAATGGGGGAAGTTCTGTTCAGATTCCGTCCCCGGGTTCATCCAGTACGATTCCACCTACACAACCAAACCCTTCCACATTCCAGCCGCCAACTCCCTCGTCATCCAACAATCCTTCACAACCAACGCATACAGCTGCAAAGAGTTCCAATCAGATGAGTACTGCTAATTCTCCGGCAAACATCTCTATGCATCAATCTGCTTTATCTGGGGATGCTGATCCTAGTGATACACAGTCCTCCGTACAAAAGATCTTACAAGAGATGATGATGAACAATCAAATGAATGGCTCGTCTAGTCTGGTTGGCATGGGTTCGGTGGTCAATGATATGAAAAATGTGAATGGGATCTTACCTACAGGCAATACAGGTCTCAACAATGGGGGGAATTGTATTGGGGGAAACGGAACAACCAACGGTGGCTCAGGCATGGGAGGAGGTGGATATGGATCTATGGGGAGTGGGCTTGGGCAGCCTGCCATGGTTAATGGAATGAGGAATGCAATGGGAAACAACTCCATTATGAACAGACGAATAGGAATGGCGTCGCTTGCTCTAGAACAAAGCATGAACGGTCAACAGCAGGATTTGGGAAACCACCTTCTAAGCGGACTCGGAGCTGTAAACGGCTTAAGTAATCTCCAATACGACTGGAAGCCATTCCCATGA 2730 45.13 MVTTGPPTPMGGGAQSVSPSLLRSDSGLLGVQGGLLPSQAFSSLVSPRNQFNSMNMLGNMSNVSSLLNQSFGNGAPNSGLPCPGGVDTGAEPDPLSGVGNGMNFNNPSSSFVASSMTNPVSSVQGQNPQFSNLSSSQLLSDQQQSQQLEPQNFHQSQQSMEQFSALQSNQQSQFQAIRGLSGVGPVKLEPQVTGSDQHGQQQHLQTLRSLGSVKLESQRLHSMRGLAPVKMEPQQSDQSLFLQQQQHQQHQHSHQHQQQQQFLHMSRQSSQAAAAQINLMHQQRLLQLQQQHQQQHLLKSMPPQRPQLQQHLQQQNLPQRSPVKPGYEPGMCARRLTYYMYHQQNRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDAWHCEICKRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGEIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSHLGAAAQKYQSAIQSASSNLSTPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDSLAKFPRRSSSSSGLTTQAQGSDEQQQQQQQQPSIAQRPNNNQSFVQASAVQISASNGVTSVNSNANQPSTSNSASTIVGLLHQNSMNSRQQNTMAKPSNSNGGSSVQIPSPGSSSTIPPTQPNPSTFQPPTPSSSNNPSQPTHTAAKSSNQMSTANSPANISMHQSALSGDADPSDTQSSVQKILQEMMMNNQMNGSSSLVGMGSVVNDMKNVNGILPTGNTGLNNGGNCIGGNGTTNGGSGMGGGGYGSMGSGLGQPAMVNGMRNAMGNNSIMNRRIGMASLALEQSMNGQQQDLGNHLLSGLGAVNGLSNLQYDWKPFP 909
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 16680622 16687656 - CmaCh04G024180.1 Cma04g02418 293499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g02418 909 MobiDBLite consensus disorder prediction 592 626 - -
Cma04g02418 909 MobiDBLite consensus disorder prediction 703 724 - -
Cma04g02418 909 MobiDBLite consensus disorder prediction 109 170 - -
Cma04g02418 909 MobiDBLite consensus disorder prediction 232 269 - -
Cma04g02418 909 MobiDBLite consensus disorder prediction 676 702 - -
Cma04g02418 909 PANTHER LIM DOMAIN-BINDING PROTEIN 1 908 IPR029005 -
Cma04g02418 909 MobiDBLite consensus disorder prediction 585 626 - -
Cma04g02418 909 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 908 - -
Cma04g02418 909 Pfam LIM-domain binding protein 335 589 IPR029005 -
Cma04g02418 909 MobiDBLite consensus disorder prediction 231 269 - -
Cma04g02418 909 MobiDBLite consensus disorder prediction 1 21 - -
Cma04g02418 909 MobiDBLite consensus disorder prediction 725 745 - -
Cma04g02418 909 MobiDBLite consensus disorder prediction 291 326 - -
Cma04g02418 909 MobiDBLite consensus disorder prediction 291 321 - -
Cma04g02418 909 MobiDBLite consensus disorder prediction 185 204 - -
Cma04g02418 909 MobiDBLite consensus disorder prediction 676 745 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02418 Cma-Chr4:16680622 Cma09g01067 Cma-Chr9:5608108 0 dispersed
Cma15g00631 Cma-Chr15:2982340 Cma04g02418 Cma-Chr4:16680622 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g02418 - - csv:101218018 1302.35