Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g02432 ATGGAAAGCAGACTCTCCGCCGCTCTTGGCCTTCCCCCGCCGGATCCGGTTTGTTATCCTTCTCTTTTCGAATTCCCCACTCTTTTCTCCAACTTTGATTCATTACTCGCCGGTAATAAAGTCCCCAAGGATCGGAATCACTTCCAGTATCCTCCTCTTCCGTTTTCTTCATTGTCCTTATCCACCGAACAGCAAGTTTTCACCCCCAAATCCTCCAACTGGCTGAAACCTCCCTCTAAAAACTCCCCCAAAATTCAATCCCTTATCAAGAATTTATCCGTCCTCGAACGGGCAGTCGTCGGCGCCGCGGGTGGTGCCATGGCTGGTGCCTTCACTTACGTTTGTCTCCTTCCGCTCGATACCATCAAAACCAGGCTCCAAGCAAAAGGGGCTTCGGAGATTTACAAGGGTACATTCGATGCCATTGTTAAGACCTTCCAATCCAGAGGGATTCTAGGGTTTTACAGAGGCGTTTCTGCTGTAATTGTCGGCTCTGCAGCTTCTTCAGCCGTTTATTTTGGAACATGCGAGTTTGGTAAGTCGATTCTGTCGAAATTTGATTGCCCTTCTCTGCTTATTCCTCCAACTGCTGGGGCTATGGGGAATATTATCTCCTCGGCTATAATGGTGCCGAAGGAGTTAATTACTCAGAGAATGCAGGTTGGGGTTAAAGGGAGGTCTTGGGAGGTTTTGATTCAGATTCTTGAGAAAGATGGTATAATGGGGCTTTATGCTGGTTATTTTGCAACGTTGTTAAGGAATTTACCTGCTGGGGTTTTGAGTTACTCTTCATTTGAGTATTTGAAAGCTGCTGTTCTTAGCAAAACGAAGAGTAACAATCTGGAACCGCTTCAGAGTGTTTGTTGTGGAGCATTGGCTGGTGCTATATCGGCCACTCTTACAACACCTCTTGATGTTGTCAAGACAAGGTTGATGACTCAAGTTCATGGGGAGGCTGCAAACATGTACAGTGGGGTGTCGGCTACGATCAAGCAAATATTGCAGGAAGAGGGGTGGATTGGATTAACCCGTGGAATGGGTCCTAGAGTTCTTCACAGTGCTTGCTTTGCAGCTATCGAAGGAGGCTTCAGAATTGGCTTCTGCTTCAACTTGATTAGCATTGTAGCTCAGATTCAACAAGGCACGTGTAGTAAGAAACCTCCAGCTAAAAGTCCTGCCATCACACTATATGAACTTTTGAAGCCCTTCAGAAGAGTTGAGACCACTAAGAAAACTTCGAATCAACTTCTCGAAGGCAGCTGCGTGAGTTTCGCCCCTCTTTCCCTTTCTTTCTTGTCCAGTGAAAACTTTACGCTCTCAGGTGACGCCCATATCAGAAACAATGCCATTCTTCTCACTAAAGAACACAGCTGCCTTCCCTTTTCTTCGAATTCCCATTCCGGGGTCGGAACCGCCTTCTACGTAAACCCTTTTCGCTTTCTTGATTTCTCCACCAATTCCACGGCTTCTTTCTCCTCTCGATTCTCCTTCTCCATTGTCCCCACCCCGTTTTGCCCTTTTGCCGATGGAATCGCCTTTCTCATCACCTCCGATACCAAATCTTTCAGCCGCTCTCTTGGGCACATGGGCCTTCCCGACCCGTCTCTTGATTCCCACCTTTCTTTCGTCGCTGTTGAATTCGACACCAATTTCCACCCTGATCTTGGCGACATTAATGACAATCATCTCGGTCTTGATCTCAACTCACCTACCTCTTTGACTTCTGTGGATTTTTGGTCAAGTGGCATTGCTTTGAAAAATGGCAGGAAGATTACTGCTTGGATTGAATACAGGGATGACATTAAGATGATCCAGGTCTGGGTTGGGTATTCCCAGACTCGACCCGCAAATCCTCTTCTGGTTGCGCAGATCGACCTTTCTAAGCAATTTAAGGAGTTTATGTATGTGGGATTCTCTGCTTCCAATGGGAAGGGCTCTGCTCTTTACATTGTTGATAGATGGCTATTTAGAACTTTTGGGTTGGTCCCTTCTTTGAGTCCTGTGGGTGCCATTAACGAAGGAGACTGTTTTATGTGCTCATTGGAGGATTCAAGCACCAATAGCAGTCATGTCGTTGATGCTCGTATGGGGAAGAAGATTGGGGAGACGACCCTTGGATTGGGAGGTTTAGCTGCATTTGTTTGCTGCATTGTTGCAATTGTTGGTTATGTTTTGATAAAGAAGTTTAGAGGTAGAATGTCCAGAGGCAGAGTAGCCCATCTAACCTCTCAAGTTCATATGAACAGAGTTCCAATGAGATTCTCTCTTCAGGAGATAAAGTTGGCTACAATGGGGTTTAATCAGAACAGAGTTGTTGGGGAAGGTGGTTCTGCAACAGTTTACAAAGGGTCTCTCTCTTCCAGTGGAGAAGTAGCCGTTAAACGATTCGAGCGAAGCACGCCAAACAACTGCCAGTGCATTCCTTTCACCACAGAGTTCGCGACAATGGCGGGTAGCTTAAGACATGAGAATTTGGTTCAACTTCATGGATGGTGCTGTGAGGCGAACGAGTTGATGCTTGTTTACGAGTACTTACCCAACGGAAGCCTTGCCGAACTTCTTCACAACAACTCCAATTCACAATTTGTTCTTCCTTGGAAGAAGAGGTTGTCTATAGTTCTTGGGGTTGCTTCTGCATTGACATATCTTCATGAAGAATGTGAGAACCAAATCATTCATAGGGATGTCAAGACCTGCAACATTATGCTTGATGCAGAGTTCAACGCCAAACTAGTGGATTTCGGTCTAGCAGAAGTATACGAACACAGTTCGAAAACAAGAGAAGCAACCATACCAGCCGGAACGATGGGATACCTTGCACCCGAATATGTTTATTCTGGTGTTCCCACTGTCAAATCCGATGTTTACAGCTTCGGTGTGGTAATGCTCGAAGTTGTGTCGGGACGGAGGGCTGTAGAAGAAGACGGGACGGTGCTCGTCAGTTGGATTTGGGATCAATGGGAAGTGGGGAAACTGATTGAAGCATCTGATTCAAGGTTGATGGGAGAGTACAATGTAGTAGAAATGGAAAGAATTCTAATGGTGGGACTTCTCTGTGTGCATCCAAATCATGAAAAGAGGCCAACTGCTAAAGAAGCTGCAAGGATCCTCAAAGGGGAAGCACCACTCCCTCTACTGCCATCAAGGAAACCAAGGGTCAATATCAAGCCTTTTTTTTCCTGA 3183 46.06 MESRLSAALGLPPPDPVCYPSLFEFPTLFSNFDSLLAGNKVPKDRNHFQYPPLPFSSLSLSTEQQVFTPKSSNWLKPPSKNSPKIQSLIKNLSVLERAVVGAAGGAMAGAFTYVCLLPLDTIKTRLQAKGASEIYKGTFDAIVKTFQSRGILGFYRGVSAVIVGSAASSAVYFGTCEFGKSILSKFDCPSLLIPPTAGAMGNIISSAIMVPKELITQRMQVGVKGRSWEVLIQILEKDGIMGLYAGYFATLLRNLPAGVLSYSSFEYLKAAVLSKTKSNNLEPLQSVCCGALAGAISATLTTPLDVVKTRLMTQVHGEAANMYSGVSATIKQILQEEGWIGLTRGMGPRVLHSACFAAIEGGFRIGFCFNLISIVAQIQQGTCSKKPPAKSPAITLYELLKPFRRVETTKKTSNQLLEGSCVSFAPLSLSFLSSENFTLSGDAHIRNNAILLTKEHSCLPFSSNSHSGVGTAFYVNPFRFLDFSTNSTASFSSRFSFSIVPTPFCPFADGIAFLITSDTKSFSRSLGHMGLPDPSLDSHLSFVAVEFDTNFHPDLGDINDNHLGLDLNSPTSLTSVDFWSSGIALKNGRKITAWIEYRDDIKMIQVWVGYSQTRPANPLLVAQIDLSKQFKEFMYVGFSASNGKGSALYIVDRWLFRTFGLVPSLSPVGAINEGDCFMCSLEDSSTNSSHVVDARMGKKIGETTLGLGGLAAFVCCIVAIVGYVLIKKFRGRMSRGRVAHLTSQVHMNRVPMRFSLQEIKLATMGFNQNRVVGEGGSATVYKGSLSSSGEVAVKRFERSTPNNCQCIPFTTEFATMAGSLRHENLVQLHGWCCEANELMLVYEYLPNGSLAELLHNNSNSQFVLPWKKRLSIVLGVASALTYLHEECENQIIHRDVKTCNIMLDAEFNAKLVDFGLAEVYEHSSKTREATIPAGTMGYLAPEYVYSGVPTVKSDVYSFGVVMLEVVSGRRAVEEDGTVLVSWIWDQWEVGKLIEASDSRLMGEYNVVEMERILMVGLLCVHPNHEKRPTAKEAARILKGEAPLPLLPSRKPRVNIKPFFS 1060
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 16754469 16759084 - CmaCh04G024320.1 Cma04g02432 293513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g02432 1060 ProSitePatterns Serine/Threonine protein kinases active-site signature. 891 903 IPR008271 GO:0004672|GO:0006468
Cma04g02432 1060 Gene3D Mitochondrial carrier domain 225 422 IPR023395 -
Cma04g02432 1060 CDD lectin_legume_LecRK_Arcelin_ConA 436 660 IPR001220 GO:0030246
Cma04g02432 1060 Gene3D - 423 662 - -
Cma04g02432 1060 SUPERFAMILY Mitochondrial carrier 99 359 IPR023395 -
Cma04g02432 1060 SUPERFAMILY Protein kinase-like (PK-like) 744 1037 IPR011009 -
Cma04g02432 1060 ProSitePatterns Legume lectins beta-chain signature. 543 549 IPR019825 -
Cma04g02432 1060 ProSitePatterns Protein kinases ATP-binding region signature. 772 794 IPR017441 GO:0005524
Cma04g02432 1060 ProSiteProfiles Solute carrier (Solcar) repeat profile. 96 182 IPR018108 -
Cma04g02432 1060 SUPERFAMILY Concanavalin A-like lectins/glucanases 431 666 IPR013320 -
Cma04g02432 1060 CDD STKc_IRAK 772 1039 - -
Cma04g02432 1060 Gene3D Transferase(Phosphotransferase) domain 1 845 1042 - -
Cma04g02432 1060 Pfam Mitochondrial carrier protein 102 185 IPR018108 -
Cma04g02432 1060 Pfam Mitochondrial carrier protein 281 360 IPR018108 -
Cma04g02432 1060 Pfam Mitochondrial carrier protein 196 273 IPR018108 -
Cma04g02432 1060 ProSiteProfiles Solute carrier (Solcar) repeat profile. 189 271 IPR018108 -
Cma04g02432 1060 Pfam Protein kinase domain 766 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma04g02432 1060 Gene3D Phosphorylase Kinase; domain 1 729 844 - -
Cma04g02432 1060 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 429 1054 - -
Cma04g02432 1060 Pfam Legume lectin domain 430 658 IPR001220 GO:0030246
Cma04g02432 1060 SMART serkin_6 766 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma04g02432 1060 PANTHER - 429 1054 - -
Cma04g02432 1060 ProSiteProfiles Protein kinase domain profile. 766 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma04g02432 1060 ProSiteProfiles Solute carrier (Solcar) repeat profile. 281 370 IPR018108 -
Cma04g02432 1060 Gene3D Mitochondrial carrier domain 53 224 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01450 Cma-Chr2:8340173 Cma04g02432 Cma-Chr4:16754469 2.23E-07 dispersed
Cma04g02432 Cma-Chr4:16754469 Cma16g00960 Cma-Chr16:7435658 7.31E-145 dispersed
Cma15g00575 Cma-Chr15:2703952 Cma04g02432 Cma-Chr4:16754469 4.16E-06 dispersed
Cma12g00773 Cma-Chr12:5145266 Cma04g02432 Cma-Chr4:16754469 9.21E-12 transposed
Cma15g00615 Cma-Chr15:2910497 Cma04g02432 Cma-Chr4:16754469 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68541 PF00069 Pkinase 1.10E-44 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g02432 - - cmax:111486861 1257.66