Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g02492 ATGATGAACACCGGGATCTTTGAAGATATTGGCTTTTGCCAAAATCTTGAGTATTTTTCGGCTCCTTCTGGGGAACAAGAGACGGGTCGGGAGCATGAAGCAGAGGCTACTTTGGAGGAAGATTATAGCGATGAAGAGCTGGATGTTGATGAGCTTGAGAGAAGGATGTGGCGTGATCGGATGCTTTTGAGGCGACTCAAAGAACAAAGCAAAGAGAAGGAAGGGGATGATAATTCAAAGCAGCGTCAATCCCAGGAGCAGGCCCGAAGGAAGAAGATGTCTCGGGCTCAAGACGGTATCCTGAAATATATGTTGAAAATGATGGAGGTTTGTAAAGCTCAAGGTTTCGTTTATGGGATCATTCCTGAGAAAGGAAAGCCAGTGAGTGGAGCTTCTGATAATCTTCGTGCCTGGTGGAAAGAACGAGTCAGATTCGATAGAAATGGCCCAGCAGCCATTACCAAATATCAGGCTGATCATGCAATTCCTGGGATCAATGATGACTGCAATACAGTGACATCCACCCCCCACACTTTACAAGAGCTCCAAGATACGACCCTTGGATCACTTTTGTCCGCTCTGATGCAGCACTGTGATCCACCCCAGCGTCGTTTTCCATTAGAGAAGGGAGTTTCCCCACCATGGTGGCCTACTGGAAACGAGGAATGGTGGCCTGAATTGGGATTACCCAAGGACCAGGGGCCTCCCCCTTATAAGAAGCCCCATGATCTGAAGAAGGTTTGGAAAGTTGGCGTTCTCACTGCTGTGATTAAGCACATGTCGCCCGACATTGCCAAGATTCGCAAGCTTGTTTGTCAGTCTAAATGTTTGCAAGACAAGATGACTGCAAAAGAGAGTGCTACATGGCTGGCCATTGTAAACCAGGAAGAAGCCTTGGCCAGGAAATTGTATCCTGATAGATGCCCACCTGTGTCGATTTGTGGGAGCGGATCTATTTTAATCAGTGACAGTAGCGATTACGATGTTGAAGTAGTGGAAGACGAACCAAATGTCGAAACAGAGGAAAGCAAGCCTCATGCTCTCAATTTCTTTAATATGGGGGCTCCTGGTCCTAGAGAGAGGCCAATGATGCCACCATTGGGACCTCAGATAAAGGAAGAACTCATGGAGAACAATTCAAACTTTATTCAAAAGAGGACTCTGATTTCTGATGAGTCAAATGCAATGATGCCTCAGAAGATATATACTTGTGAAAATTCTCAGTGCCCATATAACAATTCGCGCCTCGGGTTTCTCGACAGGACTTCGAGAAACAACCACCAGTTGAACTGCCCATTTAGGAGTGATTCTTCCCCAATATTTGGCATCCCAAACTTTCTAACTAACGATGATAAATCATCTCCAGTTCTTCCCTCCTTTAACCATTCCAAGCCTCCTACCCGGCCTATGAACCCAACTCCACCCCTCAGAGTATCAGGCCTTGGACTTCCAGACGACGACCAGAAAATGATCACTGACCTTCTAAGTTTCTACGATTCTAACCATCAACAGGACAAGATTTTGATTTCCGGGAACGTCGAAGCAAGAGCCGATCACAACCAACAGCTGCCAACATTCCAACTCCAAGTTGATGATAACTTGTATTGCCAAGGAGCAATGGTGGGGGGAAGTAGCATGCCAATGCAGCTCCCTGATTTCTCTTCCACAAAAGTCCCATTTGACGAATACAAGACGTTCGATTCTCCTTTCGGCATGTATCCCAACGATAACATTCCCGACTTCAGATTTGGTTCTCCGTTTAACTTGGCATCAATCGATTACCCAGTAGACCCACCGTTGCCAAAGCAAGATACACAATTGTGGTACCTTTGA 1833 46.15 MMNTGIFEDIGFCQNLEYFSAPSGEQETGREHEAEATLEEDYSDEELDVDELERRMWRDRMLLRRLKEQSKEKEGDDNSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKERVRFDRNGPAAITKYQADHAIPGINDDCNTVTSTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGNEEWWPELGLPKDQGPPPYKKPHDLKKVWKVGVLTAVIKHMSPDIAKIRKLVCQSKCLQDKMTAKESATWLAIVNQEEALARKLYPDRCPPVSICGSGSILISDSSDYDVEVVEDEPNVETEESKPHALNFFNMGAPGPRERPMMPPLGPQIKEELMENNSNFIQKRTLISDESNAMMPQKIYTCENSQCPYNNSRLGFLDRTSRNNHQLNCPFRSDSSPIFGIPNFLTNDDKSSPVLPSFNHSKPPTRPMNPTPPLRVSGLGLPDDDQKMITDLLSFYDSNHQQDKILISGNVEARADHNQQLPTFQLQVDDNLYCQGAMVGGSSMPMQLPDFSSTKVPFDEYKTFDSPFGMYPNDNIPDFRFGSPFNLASIDYPVDPPLPKQDTQLWYL 610
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 17074489 17076321 - CmaCh04G024920.1 Cma04g02492 293573
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma04g02492 610 Gene3D - 82 162 IPR023278 GO:0003700|GO:0005634
Cma04g02492 610 Coils Coil 35 69 - -
Cma04g02492 610 SUPERFAMILY DNA-binding domain of EIN3-like 176 300 IPR023278 GO:0003700|GO:0005634
Cma04g02492 610 MobiDBLite consensus disorder prediction 22 45 - -
Cma04g02492 610 Gene3D - 174 307 IPR023278 GO:0003700|GO:0005634
Cma04g02492 610 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 6 609 IPR006957 GO:0005634
Cma04g02492 610 Pfam Ethylene insensitive 3 50 297 IPR006957 GO:0005634
Cma04g02492 610 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 6 609 - -
Cma04g02492 610 MobiDBLite consensus disorder prediction 67 94 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02492 Cma-Chr4:17074489 Cma10g00973 Cma-Chr10:5025672 0 dispersed
Cma15g00551 Cma-Chr15:2568863 Cma04g02492 Cma-Chr4:17074489 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
34964 PF04873 EIN3 4.20E-130 No_clan Cma TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g02492 K14514 - csv:101214396 995.727