Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g02584 ATGGCTTCCAACACCTTGATGAGCTTCGGCATTGCCACCACCGCCTTCCCTTCCGTCCTCTCCTCCTCCAAGTCTAAATTCGCCACCGGTGTCCCGATTTCCGGCGTCTCCGTTAATGCTTCCTCTCGATTTTCCATGTCCGCTGACTGGATGCCTGGCCAGCCCCGCCCGCCGTATCTTGACGGCTCTGCCCCCGGTGATTTTGGCTTTGACCCTCTTCGGCTGGGAGAAGTGCCAGAGAATCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATGTTGGTACCTGAGGCGTTGGGATTGGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCTATTCCAGGAGGCCAAGCTACCTACCTGGGGCAACCAGTTCCATGGGGAACTTTGCCAACCATTTTGGTCATTGAGTTCCTTGCCATTGCCTTTGTAGAGCACCAACGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCTGGAGGTGCTTTTGACCCATTGGGCTACTCCAGGAACCCTGAAAAGTTGAAGGAATACAAAGTCAAGGAGATCAAAAATGGTCGGTTGGCGTTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCGGCATACCCAGGAACAGGGCCACTGGAGAACTTGGCTACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATCATCATCCCCAGAACGATTTCCCCTTGA 741 53.44 MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSRNPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17715041 17716913 - CmaCh04G025840.1 Cma04g02584 293665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g02584 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 26 237 IPR001344 GO:0009765|GO:0016020
Cma04g02584 246 SUPERFAMILY Chlorophyll a-b binding protein 40 240 - -
Cma04g02584 246 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
Cma04g02584 246 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 26 237 - -
Cma04g02584 246 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g02584 Cma15g00450 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00360 Cma-Chr3:4245551 Cma04g02584 Cma-Chr4:17715041 6.09E-48 dispersed
Cma04g02584 Cma-Chr4:17715041 Cma11g00139 Cma-Chr11:750299 6.40E-49 dispersed
Cma15g00450 Cma-Chr15:2007952 Cma04g02584 Cma-Chr4:17715041 2.63E-176 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g02584 K08907 - csv:101211428 492.656