Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g02608 | ATGGAGATTAGCTACGCATCACCTAGCGCGTCTAGTCTTGCTTCCTCTAATTCTGCCCTTTCATCCATGCCTTCCTCCACCCGACCGGTCAAGGTCATTCCCTTGCAGCATCCTAGTACGACGTCGTCCTCGCCGGCTGGTGGTTATTCCGCTGGCGTTCTGGTGAAAAAATGGACGGGGAAGGTTAAGCAGATGACTTGGATTAACTGGATGGAGCTTCTGCTACCGTGCTCGCGTTGGATTAGAACGTATAAATGGCGGGAGTATTTACAGAGCGATCTCTTGTCCGGGATTACCATTGGCATCATGCTCGTTCCGCAGGCAATGTCTTATGCGAAATTAGCCGGGCTTCAACCAATATATGGACTTTATTCTGGTTTTCTCCCTTTGTTCGTCTATGCATTTTTTGGTTCTTCTCGTCAGCTTGCTGTTGGTCCAGTAGCATTGGTTTCTCTCCTGGTTTCTAATGTCCTGGGTGGAATTGTCAATTCATCTGAGGAACTATATACTGAACTTGCGATATTATTGGCACTCATGGTTGGAGTATTGGAATGTGTGATGGGGCTCTTGAGTCACTCTGTAATCTCTGGCTTTACTACAGCTTCTGCCATTGTGATTGGATTATCCCAAGTGAAATATTTTCTGGGGTATGATGTATCAAGAAGTAGCAAAATTGTGCCTCTAATTGAAAGCATAATAGCTGGAGCAGACGGGGGAAAAACAAGGAAGCACTTACGGTTTCTCAGAGTTGCTGGTCCCCTTACAGCAGTTGTTATGGGTACAACATTGGCGAAAGTATTGAATCTTCCATCCATTTCATTGGTTGGAGACATTCCCCAAGGCCTTCCGAAGTTTTCCGTTCCTAAAAGTTTTGAGCATGTGAAGTCGTTGATTCCAACTGCCTTTCTGATCACAGGAGTAGCTATATTGGAATCTGTTGGGATTGCGAAAGCATTAGCAGCCAAGAACGGGTACGAGTTAGATTCAAATCAGGAGTTATTTGGTCTTGGAGTATCGAATGTTGTTGGCTCATTCTTTTCAGCATATCCCACAACAGGTTCTTTCTCAAGATCAGCTGTGAACCACGAAAGTGGAGCAAAAACAAGCTTATCTCAGATTGTTACAGGAATCGTTATGGGTGGTGCCCTTCTTTTCTTGACACCATTGTTTGAGCACATACCTCAGTGTGCTTTGGCCGCCATTGTGATTTCCGCTGTAATAACTTTGGTGGATTACGACGAGGCTATTTTTTTGTGGCGTATAAATAAGAAAGATTTTCTTCTTTGGGTGATTACTGCCATTACTACGTTGTTCCTTGGTATTGAGATTGGTGTCTTAATTGGGGTGGGTGTTTCACTGGCCTTTGTCATTCACGAATCTGCAAATCCACATATGGCTGTATTGGGGCGTCTTCCTGGCACAACTGTGTACAGAAATATTCAACAGTATCCTGAGGCATATACTTACAATGGAATTGTGATTGTTCGGATTGATGCACCAATTTATTTTGCAAACACGAGTTACATCAGTGACAGGCTACGTGAATATGAAGTTGAAGTGGACCGATCTACTGGTCGTGGACCAGATGTTGAAAGAGTCTATTTCGTGGTTATAGAGATGGCACCTGTTACTTACATAGATTCAAGTGCTGTCCAGACTCTAAAAGATTTGTATCAAGAGTACAAACTACGTGATATTCAGATTGCCATTTCCAATCCGAATCGAGATGTTCTACTTACATTTTCAAGATCTGGCGTTGTTGAGCTTATCGGGAAGGAGTGGTTTTTTGTTAGAGTTCATGATGCAGTCCAAGTTTGTCTTCAGCATGTGGAGAGCCTAAAGGAAACAACCATGAGATCAGTTTCTTCTCCAAATGATGCATCGACCTATATCCAAAGATCTTCAGCACCTAGCAATGGCAGTACCGAAGTTTCTCCATCGAAAACAGAAAAACGAGATTATCTCGAGCATCCATTCGAAGGTACTGGTCTTAGAAGAAGTCGCTCACTGTCCGCAGCATCGTTGCTTGACGGTGGGAAGCAGAAGAGTTCCTCTGGGTTAAAAGATGAAAATGGAGCTGCATATAGTAACTTAATTGGCACTTCAGATCAGCAGTGTGAACGTTCAAATCGCCGTCAAATATCACCATTAAGAAGACAGTGTAGAGAAAAGCAATTTGAGATGATTTATAACGATTATGGAGCTGTAACAGAGAGGCCATGTTCTGCTGTGTCGTCCCGAAGCTATTGTGATTCTTCAGGAAATTCTTCCGCTTCATCTGGTAATGTCTCGAGCAAAATCTTGGATCGGTATATTGATAATGGAGAGCAACAGGTAGAATCAAGCAAACCCCAACACTGTATTCCTCCCAGAAATTACCCTGGACATGGTAGTCGGAGGCGGCCCCCACGTGGTCGAAGTATAGCACCTACTTCGCCGAAACATGTTATTAATGAAAAGTCAATGAGTCGTCCATCTGAAGAATTCCCAAGTTCAAATTATCACCACTTTCCTGCAAAGTATGGTGAAAATGGATTAGGACATGAATCTCCAAGGACCATAGCGAAGAATCTAATCGAGATACTCTCCCAGTCTCATGGGATTCCTAAAACAAGTCCAAAGGGTTTCGACAATAGTATGCCAATCACTGTAGGCGATATACTCGATAGGTGCGCAAGTGAAGAGTATGATTCCAATGTGGATGTCATACCCCAGAAATTCTATTCAGTTCATGAACCTTCAGAAGCGATTAATAGAAATAAGATGGAGAATTCTGGTTTAGATAGACAGAACTTAATAGATCATAGTGAAGTGTTGAACCTTGTTGAAACCAAAGAGGAAATGGATGGGGAACTCAAGAGGAGAATCAAGGTGGCAAAGGAGAGAGTCATGCTTTTCAGAGAAGAACGAGACCGGGAAAGCTTTCTTCAACAGAGGACCGGAGTTTCGGGTTTGGTTCAGACAATTAGACATCTTTCTGAGGAGAAAACGAGCTTAGCACTTGAGGTTCTAAGTCTTCTAGAGTCCCAAATTATTGAAAGGGCTTCTGCAAAGGAAGAGCTGAGACTGGCAAAGGAAACATTGGATTCTCAAACTAAGAAACTGGATAGAGAAAAGATTGAATTGCAGTCAGAACTGGAGGTAGAGCTCGACAGAAGGTCGAACGACTGGTCGTTAAAACTAGAAAAATACCAGTTGGAAGAACAGAGGCTTCGTGAAAGAGTTCGGGAGCTAGCAGAGCAGAATGTATCTCTACAGAGGGAAGTTTCTCTTATCAATGAGAGGGACACAGAGAATCGAAGCCTAATATCAAATTCGGAGCAAAAAGTTAAGGAATTAACCATAATGATGGATAAATTTCGGGACGAAAACCAAGTTTTGATGCAGAATCTCTCCGACTTGCAAGATAAGTACGAAACTGCTAAAGAAGATAGAGAATCCTTTAAGAGAAATTTTGAGGAGAAGGATAAAGAATGCAAGGAGTTGTATAAAGCAACAACAAGATTAACGAGGACCTGCTGTGACCAGCAGAAAACAATCGATGGATTGCAGGAAAGGTTTACTCAAGAATTAGGGAAGAACACAGAACTTGAAAAGTTAGATAAGCGAGTCGTAAAATTGCAGATGGAGCAAATAAGGTTAACTGAAGTAGAACTGGGATTAAGAAGGGAATTAGAATCTTGCAGGTTCGAAATTGATTCCCTTCGGCACGAGAACATAAGCATCTTCAATCGCTTAAAGAATAGTGAGAAAGATAATGGTGCCTTAACCATCAAGCTGGATGAGGAAATGTTAGCTCGCGTTGATTGTCTACAACATCAAGGGCTAACATTGTTAAACGAAAGCTCCCAGTTATGTGCAGAATTACTTGAATTCATCAAAGGGAAAGTTCATTACCTTTCAGAAAGTATACAGGGGATGGAGGCTGTGAAGAACAATCTGGATGGGCTATACTTCATTGAATCTGAGATGAAAGTTCAAGGATTAAAGCGTGGAACCGAAAGCTTAAAACGGAGTTTATCGATAGTATCTTCGTTGTTGCATAAGAAAACCAATGCAGATGGGTTAATGCATTTACATGGTGATGCTTCAGAGCATGTTTTAAACTCCGAGCTCAAAGCTGAACGGTTGTTAACGAGTCTGGTGAAAGAGAAGCTTTACTCTAAGGAGCTGGAAATCGAGCAGCTGCAAGCTGAAATTGCAACGGCAGCTAGAGCAAACCATATTCTTAGATGTGAAGTGCAAAATGCACTAGACAACTTATCCTGCATTACACACAAGCTAAAGGATCTTGAACTCCAGATTCTGAAAAGGGATAAGAATGTGAACCAGCTACAAAATGACCTTGAAGAATCTACCACAGAATTGGCTATCATTAGGGGAACCGTGCCAAAGATTTCTGAGGAGAGAGATATTATGTGGGATCAAGTGAAACAATACAGTGAAGAGAATATGCTACTTAACTCGGAGGTTAATCTATTGAAAAAGAAGATAGAATCCTTGGAGGAAGACATACTTCTCAGGGAAGGTCAGATCACGATTCTTAAAGACTCCATGAGAAACAAATCTTTTGACCTTCTGGGTAATATTGAATCTACAGACGAGTTTCTTGTACGATGA | 4620 | 41.97 | MEISYASPSASSLASSNSALSSMPSSTRPVKVIPLQHPSTTSSSPAGGYSAGVLVKKWTGKVKQMTWINWMELLLPCSRWIRTYKWREYLQSDLLSGITIGIMLVPQAMSYAKLAGLQPIYGLYSGFLPLFVYAFFGSSRQLAVGPVALVSLLVSNVLGGIVNSSEELYTELAILLALMVGVLECVMGLLSHSVISGFTTASAIVIGLSQVKYFLGYDVSRSSKIVPLIESIIAGADGGKTRKHLRFLRVAGPLTAVVMGTTLAKVLNLPSISLVGDIPQGLPKFSVPKSFEHVKSLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVVGSFFSAYPTTGSFSRSAVNHESGAKTSLSQIVTGIVMGGALLFLTPLFEHIPQCALAAIVISAVITLVDYDEAIFLWRINKKDFLLWVITAITTLFLGIEIGVLIGVGVSLAFVIHESANPHMAVLGRLPGTTVYRNIQQYPEAYTYNGIVIVRIDAPIYFANTSYISDRLREYEVEVDRSTGRGPDVERVYFVVIEMAPVTYIDSSAVQTLKDLYQEYKLRDIQIAISNPNRDVLLTFSRSGVVELIGKEWFFVRVHDAVQVCLQHVESLKETTMRSVSSPNDASTYIQRSSAPSNGSTEVSPSKTEKRDYLEHPFEGTGLRRSRSLSAASLLDGGKQKSSSGLKDENGAAYSNLIGTSDQQCERSNRRQISPLRRQCREKQFEMIYNDYGAVTERPCSAVSSRSYCDSSGNSSASSGNVSSKILDRYIDNGEQQVESSKPQHCIPPRNYPGHGSRRRPPRGRSIAPTSPKHVINEKSMSRPSEEFPSSNYHHFPAKYGENGLGHESPRTIAKNLIEILSQSHGIPKTSPKGFDNSMPITVGDILDRCASEEYDSNVDVIPQKFYSVHEPSEAINRNKMENSGLDRQNLIDHSEVLNLVETKEEMDGELKRRIKVAKERVMLFREERDRESFLQQRTGVSGLVQTIRHLSEEKTSLALEVLSLLESQIIERASAKEELRLAKETLDSQTKKLDREKIELQSELEVELDRRSNDWSLKLEKYQLEEQRLRERVRELAEQNVSLQREVSLINERDTENRSLISNSEQKVKELTIMMDKFRDENQVLMQNLSDLQDKYETAKEDRESFKRNFEEKDKECKELYKATTRLTRTCCDQQKTIDGLQERFTQELGKNTELEKLDKRVVKLQMEQIRLTEVELGLRRELESCRFEIDSLRHENISIFNRLKNSEKDNGALTIKLDEEMLARVDCLQHQGLTLLNESSQLCAELLEFIKGKVHYLSESIQGMEAVKNNLDGLYFIESEMKVQGLKRGTESLKRSLSIVSSLLHKKTNADGLMHLHGDASEHVLNSELKAERLLTSLVKEKLYSKELEIEQLQAEIATAARANHILRCEVQNALDNLSCITHKLKDLELQILKRDKNVNQLQNDLEESTTELAIIRGTVPKISEERDIMWDQVKQYSEENMLLNSEVNLLKKKIESLEEDILLREGQITILKDSMRNKSFDLLGNIESTDEFLVR | 1539 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 17821985 | 17836793 | - | CmaCh04G026080.1 | Cma04g02608 | 293689 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g02608 | 1539 | MobiDBLite | consensus disorder prediction | 616 | 645 | - | - | |
Cma04g02608 | 1539 | Coils | Coil | 1061 | 1095 | - | - | |
Cma04g02608 | 1539 | Coils | Coil | 1007 | 1045 | - | - | |
Cma04g02608 | 1539 | PANTHER | SULFATE TRANSPORTER 4.1-RELATED | 46 | 237 | - | - | |
Cma04g02608 | 1539 | CDD | STAS_SulP_like_sulfate_transporter | 483 | 599 | - | - | |
Cma04g02608 | 1539 | PANTHER | SULFATE TRANSPORTER | 239 | 627 | IPR001902 | GO:0015301|GO:0016020|GO:0055085 | |
Cma04g02608 | 1539 | Coils | Coil | 1103 | 1158 | - | - | |
Cma04g02608 | 1539 | MobiDBLite | consensus disorder prediction | 777 | 831 | - | - | |
Cma04g02608 | 1539 | MobiDBLite | consensus disorder prediction | 814 | 830 | - | - | |
Cma04g02608 | 1539 | MobiDBLite | consensus disorder prediction | 646 | 660 | - | - | |
Cma04g02608 | 1539 | Pfam | STAS domain | 483 | 602 | IPR002645 | - | |
Cma04g02608 | 1539 | Gene3D | STAS domain | 462 | 609 | IPR036513 | - | |
Cma04g02608 | 1539 | PANTHER | SULFATE TRANSPORTER 4.1-RELATED | 239 | 627 | - | - | |
Cma04g02608 | 1539 | Pfam | Sulfate permease family | 90 | 235 | IPR011547 | GO:0016021 | |
Cma04g02608 | 1539 | Pfam | Sulfate permease family | 243 | 432 | IPR011547 | GO:0016021 | |
Cma04g02608 | 1539 | Coils | Coil | 1386 | 1462 | - | - | |
Cma04g02608 | 1539 | PANTHER | SULFATE TRANSPORTER | 46 | 237 | IPR001902 | GO:0015301|GO:0016020|GO:0055085 | |
Cma04g02608 | 1539 | SUPERFAMILY | SpoIIaa-like | 484 | 606 | IPR036513 | - | |
Cma04g02608 | 1539 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cma04g02608 | 1539 | ProSiteProfiles | STAS domain profile. | 482 | 606 | IPR002645 | - | |
Cma04g02608 | 1539 | ProSitePatterns | SLC26A transporters signature. | 119 | 140 | IPR018045 | GO:0008271|GO:0008272 | |
Cma04g02608 | 1539 | MobiDBLite | consensus disorder prediction | 616 | 660 | - | - | |
Cma04g02608 | 1539 | Coils | Coil | 1477 | 1504 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma04g00253 | Cma04g02608 | CCT | |
Cma04g02608 | Cma15g00426 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g02608 | Cma-Chr4:17821985 | Cma08g00327 | Cma-Chr8:1868717 | 8.05E-98 | dispersed | |
Cma15g00413 | Cma-Chr15:1855405 | Cma04g02608 | Cma-Chr4:17821985 | 1.59E-17 | wgd | |
Cma15g00426 | Cma-Chr15:1897938 | Cma04g02608 | Cma-Chr4:17821985 | 0 | wgd | |
Cma04g00253 | Cma-Chr4:1233583 | Cma04g02608 | Cma-Chr4:17821985 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g02608 | K18059 | - | bhj:120080520 | 1405.96 |