Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g02634 | ATGGACATCCATGTAATACCACAAACGCAAATCGATGACGGCCGTGCTTCAGTCAGCGTTCTTGATTCTGTAGTCTCGTCTCCAATCAACCCCCTCATTCACCTGCGGTTCGGCGGGAGAATGGAATTTGCCGACGAGCACACCGCCGGAGCCACCACCTCCAACTCCGACCGCCATAAGCCCTCCGACACGAGATACGGCGTTGACCTCTCATCCTCTGATAACGATACCGAAGATGCACATCCTGTTTTCTCTAACATGCCTGCTTCACTTGCACCACCAGTTTCTCCGATCCTTCCTCTGCAAAGTAAATGTAATGTAGTAATTCAGGCTGATATGGATGATAAATTGGAGACCATACAAAATATATGTCAGAAAATTGTGGACACCACGAACTTATACTCATTTTCTAAATTGGATGATCATCAAGTATATTCCCTTATGAGGCTGAGGGAAATTTCTCATCGGGTTATTAGTGACCGAGATTCAAGGGTGACAAAAAATGATGTGATTAGTGCTATGTGCTTTTACATCAACAGGATGGCAGGTAAGTGCAAGGATATTGTTGACATTTTGAATAGGATATCATATAAAGACCTAGACAGCCAGCAAGTGCAACAGCTATTGAGATTGAAAGAGCTTCTATGTGGGATTGTTGATGGAGCTAAAGATGTGGAGATTGAACCTTCCCATATTGTTGAACAGGGAATTGCAAATGATATGTGGACAACAGAGAGTCTAGAGGTCGAGCCAATTGACTCCAGCAATGATGATGTACTTCTTGGAGATACACAAATTATAATGGTTGAAGTTGAACAGGCAGTGGCTGAGTCTAGGCTCGAGAATGAATATTGTGACCTGTCACATGTTAAGCACACTGTTAGTTGGCCACCACATGGTTGCTTAACCTTAGAGTGGGTTGTAGAGATGATGAAAACACTGGAACAGTCTTCAAGAAATTACTCGCCTGCAGAGTTTCAACTTGTCATGCCAGTTTCTGTGGTAGATGAAATACTAGATATGGCTGCAAGCATCCTTCACAAGGAACCAAACTGTGTGGAAATTGACTGCCACGGAGAAGTTTCAAAAGTTGTTATAGTTGGGGACATTCATGGTCATTATCACGACTTACTTCACCTCTTTGAACTTGCTAACTTACCATCTAAGAGCCAATATTATGTTTTTAATGGCAATTATGTGGACAGAGGAGCATGGGGACTGGAGGTGTTTTTGGTCTTAATGGTGTGGAAGATCTTGATGCCTGATAGAGTATGTCTACTCCGTGGAAATCATGAAACCAGAATCTGTACATCATCCTACGGTTTTGAGAAAGAAGTAAGGACAAAATATGGCGAGCAAGGTGAAAATGTATATCACAGGTGCTTGGAAACATTTAAGGAACTTCCTTTGGCTGCAATTATTGCTGGAAAAGTATATACAACCCATGGAGGTTTATTTCGTAAGCCATGCAATCCTGATGTGCAGAATTACGAGGAAAGGAAGACACGCGAGCTGGAGATTGGATCCTTAGAAGACTTATCCAAGCTCGAAAGGTTTTTTGTCGATGTTCCAACTAAAGATGAAGATCCAAATATAATTTTGGCAGATGTATTATGGTCGGATCCTTCTAAAGTCGATGGTTTAAGGAAAAACCAAGCCAGAGGTGCAGGTTTATTGTGGGGTCCTGATGCGACTGAAGCATTCTTAAAGCTGTCTAATTTAAAGTTGATCATTAGATCACATGAAGGTCCAGATTCAAGGGACGGCAAAATTGATTTTGATGATATGATAATGGGTTATAGCTCAGATCATGACAGAGAATCAGGGAAACTATATACTCTATTTAGCGCTCCGGGTTTCCCACAGTTTGGTCGCAAGAGCTACAATAACGAGGGAGCATATGCTACTTTGAAGCATCCAGATTTTGAGATTCCAACCTTCCACACATTTAAAGCTGTAGATAAACCAAAGATAGACGTTTGCTATTTTGGCTGTGAAGGACATGATGTAGATTTAGACTTGACATTAATGGCTCTGGCTGATGCCGTCTCTTCTAAAAACTCTAGTCCTATTGAGATTCACTCTGGGGTTGATTTTGAGGCATTGGGCATATTAAACCCACCCTCTTGGAGCGTTACAATGACAGATGATGCTACAGGTACCCAGAGTGTTAAGATTCCGAAGGCCCCCGTGGTAGAAGGGTTGCCTTTGCCACCGAGCATCGAGGAACCTCATAAGGCTGCGTATGAGTACTTCCTGGAGCTCATTGCAGGACTGAAGTTTATGCTTCAAACAACGGAAAATAAGGACAAGTTACCCATTCCTCATCAAAGATCTGGTTGGGTGCCCAAAGGGAAATATCTCTCTGCTTTGTATAGCAGAGCGAATGAATTGACATAG | 2400 | 42.46 | MDIHVIPQTQIDDGRASVSVLDSVVSSPINPLIHLRFGGRMEFADEHTAGATTSNSDRHKPSDTRYGVDLSSSDNDTEDAHPVFSNMPASLAPPVSPILPLQSKCNVVIQADMDDKLETIQNICQKIVDTTNLYSFSKLDDHQVYSLMRLREISHRVISDRDSRVTKNDVISAMCFYINRMAGKCKDIVDILNRISYKDLDSQQVQQLLRLKELLCGIVDGAKDVEIEPSHIVEQGIANDMWTTESLEVEPIDSSNDDVLLGDTQIIMVEVEQAVAESRLENEYCDLSHVKHTVSWPPHGCLTLEWVVEMMKTLEQSSRNYSPAEFQLVMPVSVVDEILDMAASILHKEPNCVEIDCHGEVSKVVIVGDIHGHYHDLLHLFELANLPSKSQYYVFNGNYVDRGAWGLEVFLVLMVWKILMPDRVCLLRGNHETRICTSSYGFEKEVRTKYGEQGENVYHRCLETFKELPLAAIIAGKVYTTHGGLFRKPCNPDVQNYEERKTRELEIGSLEDLSKLERFFVDVPTKDEDPNIILADVLWSDPSKVDGLRKNQARGAGLLWGPDATEAFLKLSNLKLIIRSHEGPDSRDGKIDFDDMIMGYSSDHDRESGKLYTLFSAPGFPQFGRKSYNNEGAYATLKHPDFEIPTFHTFKAVDKPKIDVCYFGCEGHDVDLDLTLMALADAVSSKNSSPIEIHSGVDFEALGILNPPSWSVTMTDDATGTQSVKIPKAPVVEGLPLPPSIEEPHKAAYEYFLELIAGLKFMLQTTENKDKLPIPHQRSGWVPKGKYLSALYSRANELT | 799 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 17967687 | 17977021 | - | CmaCh04G026340.1 | Cma04g02634 | 293715 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g02634 | 799 | SUPERFAMILY | Metallo-dependent phosphatases | 308 | 658 | IPR029052 | - | |
Cma04g02634 | 799 | PRINTS | Serine/threonine phosphatase family signature | 363 | 390 | IPR006186 | GO:0016787 | |
Cma04g02634 | 799 | PRINTS | Serine/threonine phosphatase family signature | 393 | 420 | IPR006186 | GO:0016787 | |
Cma04g02634 | 799 | PRINTS | Serine/threonine phosphatase family signature | 610 | 626 | IPR006186 | GO:0016787 | |
Cma04g02634 | 799 | PRINTS | Serine/threonine phosphatase family signature | 426 | 450 | IPR006186 | GO:0016787 | |
Cma04g02634 | 799 | PRINTS | Serine/threonine phosphatase family signature | 463 | 489 | IPR006186 | GO:0016787 | |
Cma04g02634 | 799 | PRINTS | Serine/threonine phosphatase family signature | 516 | 543 | IPR006186 | GO:0016787 | |
Cma04g02634 | 799 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED | 116 | 772 | - | - | |
Cma04g02634 | 799 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 427 | 432 | IPR006186 | GO:0016787 | |
Cma04g02634 | 799 | SMART | pp2a_7 | 330 | 654 | IPR006186 | GO:0016787 | |
Cma04g02634 | 799 | Pfam | Calcineurin-like phosphoesterase | 363 | 584 | IPR004843 | GO:0016787 | |
Cma04g02634 | 799 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE | 116 | 772 | - | - | |
Cma04g02634 | 799 | MobiDBLite | consensus disorder prediction | 49 | 82 | - | - | |
Cma04g02634 | 799 | Gene3D | - | 290 | 683 | IPR029052 | - | |
Cma04g02634 | 799 | MobiDBLite | consensus disorder prediction | 66 | 80 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g02634 | Cma-Chr4:17967687 | Cma16g01290 | Cma-Chr16:9767684 | 3.82E-134 | dispersed | |
Cma06g00171 | Cma-Chr6:850961 | Cma04g02634 | Cma-Chr4:17967687 | 1.72E-14 | dispersed | |
Cma06g00172 | Cma-Chr6:851978 | Cma04g02634 | Cma-Chr4:17967687 | 8.00E-11 | dispersed | |
Cma04g02628 | Cma-Chr4:17941601 | Cma04g02634 | Cma-Chr4:17967687 | 1.31E-08 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g02634 | K04460 | - | csv:101211172 | 1329.69 |