Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g02695 ATGCAGAGCGCTGTATTGGCTTTCGCCATGTCTTTTTCCCCTAACACTCCTGCTAGGGCTACTTCTTTTCCATTGCCTCTAATTTCATGCCGACTTCGAAGCCCTAATTTGCCTCACTTTCCTCACATTGTTCCGTTTCGTTCCTTCTCATCCTCGATCGCTGTTTCTTGCTCCGGATTCAGTTCGAGGCTCCAGAAATTCACGAGAACTGCGGCTTCCTTGCCGGAGAGCGCCGGCGAGGCTGAGGAATCGGCCGATTTCGTTAACAATCTGCGGCTTGGTTCAATGTTTGGCGTTTGGTACCTTTTGAATATCTACTACAACATTTTCAACAAACAGGTTCTGAAAGCCTTCCCCTTTCCAACTACGGTGACTGCTTTTCAATTCGCGTGTGGAACGGTCATAGTAAGCTTAATGTGGGCTCTTAATTTTCATCCCAGACCCAACGTCAATCGCTCCCAGTTTGCTGCCATTCTTCCGCTGGCTGTAGCGCACACCATGGGGAACATATTGACCAATGTCAGTCTTGGCAAAGTTGCGGTCTCATTCACTCACACCATCAAAGCAATGGAGCCATTTTTCACTGTCCTTCTCTCTGCTTTCTTCTTGGCTGAGAGGCCCACATTTTGGGTTGTTCTTTCGCTCATACCCGTTGTAGGAGGAGTGGCACTCGCATCTTTTACTGAAGCCTCATTTAATTGGATTGGCTTCAGCAGTGCCATGGCTTCAAATCTCACAAATCAATCACGTAATATCTTCAGTAAAAAGCTCATGGTCCACAAAGAGGCGCTGGACAATATCAATCTCTTCTCTGTAATTACTATCATTTCATTTATCCTGCTGGTTCCCTCAGCTCTTCTCCTTGAAGGCACTAAATTTAGTCCTTCATACCTGCAATTAGCTGCAAATCAAGGGTTGAATGTCAGCGAGCTATGCATTAGGTTGCTTCTATCTGGCATTTGTTTTCATAGCTACCAGCAGGTTTCTTATTCAATACTACAGGAAATTTCACCAGTAACCCATGCTGTAGGGAACTCTCTGAAGCGGGTGGTGGTGATAGTGTCGTCTGTTATTTTCTTCCAAACAGCCGTCTCACATCTAAACGCCCTCGGAACTGGAATAGCTCTCATGGGAGTCTTTTTGTATTCAAGGGCGAAGCGTATGAACCCAAACCTGAAGACTCTATAA 1188 45.88 MQSAVLAFAMSFSPNTPARATSFPLPLISCRLRSPNLPHFPHIVPFRSFSSSIAVSCSGFSSRLQKFTRTAASLPESAGEAEESADFVNNLRLGSMFGVWYLLNIYYNIFNKQVLKAFPFPTTVTAFQFACGTVIVSLMWALNFHPRPNVNRSQFAAILPLAVAHTMGNILTNVSLGKVAVSFTHTIKAMEPFFTVLLSAFFLAERPTFWVVLSLIPVVGGVALASFTEASFNWIGFSSAMASNLTNQSRNIFSKKLMVHKEALDNINLFSVITIISFILLVPSALLLEGTKFSPSYLQLAANQGLNVSELCIRLLLSGICFHSYQQVSYSILQEISPVTHAVGNSLKRVVVIVSSVIFFQTAVSHLNALGTGIALMGVFLYSRAKRMNPNLKTL 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18244050 18247920 + CmaCh04G026950.1 Cma04g02695 293776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g02695 395 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 45 389 - -
Cma04g02695 395 Pfam Triose-phosphate Transporter family 92 383 IPR004853 -
Cma04g02695 395 PANTHER SOLUTE CARRIER FAMILY 35 45 389 - -
Cma04g02695 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 311 388 - -
Cma04g02695 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 131 228 - -
Cma04g02695 395 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 91 390 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02695 Cma-Chr4:18244050 Cma07g00303 Cma-Chr7:1339664 1.40E-76 dispersed
Cma13g00885 Cma-Chr13:7158062 Cma04g02695 Cma-Chr4:18244050 3.03E-144 wgd
Cma18g00172 Cma-Chr18:873560 Cma04g02695 Cma-Chr4:18244050 9.32E-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g02695 K15283 - csv:101217436 624.394