Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g02712 ATGAACCCACTTGCTCCCTTTGCCACAAACACTGCAGATCCTTTGAATCTCTCCGGGAACATCTCATTGAGTCAAATCATGGCCCGTTTTCGCAACATGGGAATTTGTGACAAATTGACGAGCGACAATGGCCGCATGAGGCGCCATGAAGCAGTGGCATTGGCTTGCAGAATGGTGGGCGGTGGCAGCGATGGGTCGTTAGATATATGCGCAAGGGTCTGCCTGATTGACGAAAAGGAAACCATCATTTTCTCTACTTATGTTAACCCAACGCTCCCCATCACAAACTATAGGTTGGAGTCCACGGGCGTTGGTCCAGAATACTTGAGGGATCATGCAATGCCATTGAAGCAAGTTCAGAAGAAAATTCAAGACATCCTGTGCAATGGTGAGCCGATGTGGAAGATTCGACCTGGGGTCGGAGGAAAAGCAAGGATTCTTGTGGGTCATGGCTTGGGAGATCACCTCAAAACCTTGCAAATTGAGTATCCACCATTCATGATAAGATACGATATTCAAAACGGGAACAAAGATCCTTACGAAGATTGTGTAGCGACCATGAGGTTGTACATGAGAATGAGAGCTCAAGTTCATAAGATAGAGGAGTATCCATTGGCTTCTGACCCACAAAACAAGAATAATTTTGCAATTTGGAAGCAATTTGAGCTTGAAAGGATGAGCCCAGAACAGATGTTGGAAATCTCAAGATCTGATTACTATTGTTGGTGCTTGGACTCCAAGCTTAATTAG 750 45.2 MNPLAPFATNTADPLNLSGNISLSQIMARFRNMGICDKLTSDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDEKETIIFSTYVNPTLPITNYRLESTGVGPEYLRDHAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKTLQIEYPPFMIRYDIQNGNKDPYEDCVATMRLYMRMRAQVHKIEEYPLASDPQNKNNFAIWKQFELERMSPEQMLEISRSDYYCWCLDSKLN 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18316699 18319260 + CmaCh04G027120.1 Cma04g02712 293793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g02712 249 PANTHER OS02G0709000 PROTEIN 24 169 - -
Cma04g02712 249 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 24 169 - -
Cma04g02712 249 PANTHER OS02G0709000 PROTEIN 170 246 - -
Cma04g02712 249 SMART exoiiiendus 50 199 IPR013520 -
Cma04g02712 249 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 170 246 - -
Cma04g02712 249 Gene3D - 46 170 IPR036397 GO:0003676
Cma04g02712 249 SUPERFAMILY Ribonuclease H-like 64 197 IPR012337 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g02712 Cma15g00333 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g01811 Cma-Chr2:10062356 Cma04g02712 Cma-Chr4:18316699 3.23E-57 dispersed
Cma04g02712 Cma-Chr4:18316699 Cma09g00835 Cma-Chr9:4115291 1.42E-11 dispersed
Cma15g00333 Cma-Chr15:1535048 Cma04g02712 Cma-Chr4:18316699 6.40E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g02712 - - qsu:111996861 342.428