Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g02721 ATGTCACAAGGCTTTGCGATCGAGCTCTATTTCGATCCGGCACTTGAAAATCAGGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATCAGTACCCAACTCATCGAAATTGAATCGCGCCCTCACATTACCCTATTTTCTAGCCCTTTCCTCGAACCCACAAAAGTTGAATCCATCGTTAAGAATTTCGCTTCGAAACAGGAACCTTTGCCTTTGTCCTTAGCGTCAATTGGCAGCCTTCCCAATGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCGATTTCACTCCTCCAATTCCAGTCCCAGTTGTGCGAAGCAATGAGGAAAGAAGGAATTGAAACTGGAGAGGAATATCGCCTTGGCTCGTGGATTCCCCATTGCTCTGTTGCTCAGGAGGTGCCCAAGGCTCGAATGGCTGAGGCATTTTGTGTTCTAAGGGATTTGAAGCTACCAGTATCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGAGAGCTCTTCTCTTTTGTTCTTGGCAACACTCTCGAAGCTTGA 552 47.1 MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLASIGSLPNDNNILFLGPAPSISLLQFQSQLCEAMRKEGIETGEEYRLGSWIPHCSVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTLEA 183
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 18355087 18355638 + CmaCh04G027210.1 Cma04g02721 293802
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma04g02721 183 SUPERFAMILY LigT-like 5 155 IPR009097 -
Cma04g02721 183 Pfam 2'-5' RNA ligase superfamily 41 155 - -
Cma04g02721 183 PANTHER - 1 182 - -
Cma04g02721 183 Gene3D Cyclic phosphodiesterase 5 178 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02721 Cma-Chr4:18355087 Cma15g00320 Cma-Chr15:1487220 7.56E-124 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g02721 - - csv:101208638 350.132