Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g02723 ATGGCTCCCACCTCTCTTGTGGTCACAATCGAGAAGAACTTACTGGAAATCAATGGCTCTGATTCTTTGTTGCTTCCCGAGAAGCAGAAGGCTGCCAGTCCCAAGCAACTCACCTGGGTTCTTCTCCTCAAAGCTCACAGAGCTCTGTTTTTCTTCTCGTGGTTCGCCATCACTGTCAAGACTCTGTTTGCTTCTGTTAAGAAGCGCATTGCTCATGCGGATGTTAACGAAGAGGGTTCCAAGAGCCGAGGGAAGTTGTATAGGTTCATTAAAGCTTTTCTCGCTATTTCTATTGTGGGTTTGATTGTTGAACTTATTGCCCATTTCAAGAAATGGAATCTGCGAATGATTCAGCCATTGGAGCTCGAGGTTCATGGGCTTCTCCAATGGTTTTATGTCTCCTGGCTTTCGTTTCGAGTTGATTACATTGCTCCATTGGTGTTAATGCTTTCGAAATTCTGCATTGTTCTATTCATGATCCAATCTCTTGATCGCCTCGTTCTCTGTGTTGGCTGCTTTTGGATCAAATTCAAGAAAATCAAACCCATCATTCAAGATGACGCTTATGATTTGGAAGACGCTTCAACTTTTCCGATGGTTTTAGTTCAAATCCCAATGTGCAATGAGAGAGAGGTTTATGCACAATCAATTGCTGCTGCTTGTGAGCTTGACTGGCCGAGGAATCGGATTTTGATTCAAGTTCTTGATGATTCAGACGATGGAAATCTTCAGCGTTTGATCAAAGAAGAAGTTCTGTCATGGAATTCAAAGGGTGTTAATATTGTTTATAGACATCGATTGATCCGAACTGGGTATAAAGCTGGGAATCTCATGTCCGCCATGGCTTGTGATTATGTTAAAGATTATGAGTTTGTAGCTATTTTGGATGCTGATTTCCAGCCCAACCCTGATTTCCTTAAACTCACTGTCCCCCATTTCAAGGGAAATCCTCAACTCGGTCTCGTCCAGGCTCGGTGGGCGTTCGTTAACCGGGACGAAAACTTACTCACAAGACTTCAAAACATCAACTTGTGCTTCCATTTTGAAGTGGAGCAGCAAGTTAATGGGGCTTTCCTGAATTTCTTTGGATTCAATGGAACGGCGGGCGTTTGGAGAACACAAGCGCTTGAGGAATCTGGTGGCTGGCTCGAGAGGACGACGGTGGAAGATATGGATATTGCAGTTCGAGCTCACTTGAAGGGATGGAAATTCATCTTCCTCAATGATGTCAAGGTGCTGTGTGAATTGCCTGAATCATATGAAGCTTACAAGAAGCAGCAACACCGTTGGCATTCTGGTCCAATGCAGCTCTTCAGATTATGCCTTCCTTCCATCATTACTTCAAAGATATCAATATGGAAGAAGACGAACTTGATATTCCTGTTCTTTCTCCTGAGAAAACTCATACTTCCCTTTTACTCATTCACTTTGTTTTGTGTCATACTTCCATTGACAATGTTTATTCCAGAAGCAGAATTGCCTCTCTGGGTAATCTGCTACATCCCAGTCTTCATGTCACTGCTAAACATTCTTCCATCCCCTAAATCCTTCCCTTTCTTGATCCCATACCTCTTGTTTGAGAACACCATGTCTGTCACAAAGTTCAATGCCATGGTTTCGGGGCTATTCCAGCTCGGAAGTTCATACGAATGGATTGTGACTAAGAAGACAGGACGATCATCCGAATCCGACTTCCTGGCATTTGCCGAGCGCGAGTCGAAAACTACAAACGAGGAGAAGATTCTGAGGAGACATTCGGAGTCGGGACTCAAGTTGTTGAGTAAATTGAACCAACAAGAGAAGCAAATGGGTTCAAAGAAGAAGAGAAACAAGGTGTATAGAAAAGAACTGGCTCTTGCTTTTCTGCTGCTAACTGCATCAGCTAGAAGCTTGTTGTCAGCACATGGAGTTCACTTCTACTTCCTGCTATTCCAAGGTTTGTCATTCCTGGCGGTGGGTTTTGACTTGATTGGTGAGCAAATGAACTGA 1989 43.54 MAPTSLVVTIEKNLLEINGSDSLLLPEKQKAASPKQLTWVLLLKAHRALFFFSWFAITVKTLFASVKKRIAHADVNEEGSKSRGKLYRFIKAFLAISIVGLIVELIAHFKKWNLRMIQPLELEVHGLLQWFYVSWLSFRVDYIAPLVLMLSKFCIVLFMIQSLDRLVLCVGCFWIKFKKIKPIIQDDAYDLEDASTFPMVLVQIPMCNEREVYAQSIAAACELDWPRNRILIQVLDDSDDGNLQRLIKEEVLSWNSKGVNIVYRHRLIRTGYKAGNLMSAMACDYVKDYEFVAILDADFQPNPDFLKLTVPHFKGNPQLGLVQARWAFVNRDENLLTRLQNINLCFHFEVEQQVNGAFLNFFGFNGTAGVWRTQALEESGGWLERTTVEDMDIAVRAHLKGWKFIFLNDVKVLCELPESYEAYKKQQHRWHSGPMQLFRLCLPSIITSKISIWKKTNLIFLFFLLRKLILPFYSFTLFCVILPLTMFIPEAELPLWVICYIPVFMSLLNILPSPKSFPFLIPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKTGRSSESDFLAFAERESKTTNEEKILRRHSESGLKLLSKLNQQEKQMGSKKKRNKVYRKELALAFLLLTASARSLLSAHGVHFYFLLFQGLSFLAVGFDLIGEQMN 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18357447 18359862 - CmaCh04G027230.1 Cma04g02723 293804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g02723 662 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 190 417 IPR029044 -
Cma04g02723 662 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 4 13 661 - -
Cma04g02723 662 Coils Coil 596 616 - -
Cma04g02723 662 SUPERFAMILY Nucleotide-diphospho-sugar transferases 200 499 IPR029044 -
Cma04g02723 662 PANTHER - 13 661 - -
Cma04g02723 662 Pfam Glycosyl transferase family group 2 292 498 IPR001173 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g02723 Cma15g00318 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02723 Cma-Chr4:18357447 Cma09g00534 Cma-Chr9:2381792 0 dispersed
Cma15g00318 Cma-Chr15:1478058 Cma04g02723 Cma-Chr4:18357447 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g02723 K20887 - csv:101208151 1181.78