Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g02725 | ATGGCCTTTCTCCTTCTCCTTTTCCTCTCCGCCTTCACTCCTTCCGCCACTGCCACTATCTTCGCCGACTACTACCGCAATTCCTGTCCTGCATTCTCTCAGATCATCCGCGACACCGTCACCAACAAGCAAATCACCACCCCGACCACCGCTGCCGCCACCCTCCGCCTCTTCTTCCACGACTGTCTCCCCAACGGCTGCGATGCCTCTATCCTCATCTCCTCCACCCCTTTCAACTCCGCCGAGCGCGACGCTGACATCAACCTCTCCCTCCCCGGCGACGCCTTCGACGTCGTCGTCCGAGCCAAAACCGCCCTCGAACTCTCCTGCCCCAACACCGTCTCCTGTGCTGACATTCTAGCCACCGCCACTCGCGACCTCCTCACTATGGTTGGCGGCCCGTACTACACCGTCTTTCTCGGCCGAAAAGACGCGAAAATTTCCAGAGCCGCCGCCATTGAAGGCACTCTGCCCAGACCCTCCATGAGTGTCTCGGAGATCATTGGAATGTTCGGCTCCAAAGGATTTTCAGTTCAGGAAATGGTGGCGTTAAGCGGCGCTCATTCGATTGGCTTCTCGCATTGCAAGGAGTTCACGTCTGGGATCTTCAATTACACCAAATCCCCGCCCTACGACAGCCATTATAACCCTAGATTCGCATTAGGGTTACAGAGAGCTTGCGCTGATTACCAGAAGAATCCGACTCTGTCCGTTTTCAACGACATAATGACGCCGAACAAATTCGACAACATGTATTTCAAGAATTTGCAGAAGGGGTTAGGGGTTCTGAAATCCGACGGCGGATTTTACAGCGATTCAAGAACACGGCCGTGGGTGGAGAAATACGCTGCAGATGAGAGAGCCTTCTTCGACGCGTTTTCTCGAGCAATGGTGAAGCTCGGTGGCTATGGCGTCAAACTGGGAAACCAAGGAGAAATTAGACGCAGGTGCGATGCCTTCAACTGA | 966 | 54.55 | MAFLLLLFLSAFTPSATATIFADYYRNSCPAFSQIIRDTVTNKQITTPTTAAATLRLFFHDCLPNGCDASILISSTPFNSAERDADINLSLPGDAFDVVVRAKTALELSCPNTVSCADILATATRDLLTMVGGPYYTVFLGRKDAKISRAAAIEGTLPRPSMSVSEIIGMFGSKGFSVQEMVALSGAHSIGFSHCKEFTSGIFNYTKSPPYDSHYNPRFALGLQRACADYQKNPTLSVFNDIMTPNKFDNMYFKNLQKGLGVLKSDGGFYSDSRTRPWVEKYAADERAFFDAFSRAMVKLGGYGVKLGNQGEIRRRCDAFN | 321 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 18364076 | 18365041 | + | CmaCh04G027250.1 | Cma04g02725 | 293806 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g02725 | 321 | PANTHER | - | 3 | 321 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | PRINTS | Haem peroxidase superfamily signature | 51 | 65 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | PRINTS | Haem peroxidase superfamily signature | 114 | 131 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | PRINTS | Haem peroxidase superfamily signature | 132 | 144 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | PRINTS | Haem peroxidase superfamily signature | 180 | 195 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | PRINTS | Haem peroxidase superfamily signature | 241 | 256 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | Gene3D | - | 23 | 321 | - | - | |
Cma04g02725 | 321 | SUPERFAMILY | Heme-dependent peroxidases | 22 | 321 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 180 | 190 | IPR019793 | - | |
Cma04g02725 | 321 | CDD | secretory_peroxidase | 23 | 320 | IPR033905 | GO:0004601|GO:0042744 | |
Cma04g02725 | 321 | ProSitePatterns | Peroxidases active site signature. | 51 | 62 | IPR019794 | GO:0004601 | |
Cma04g02725 | 321 | ProSiteProfiles | Plant heme peroxidase family profile. | 19 | 321 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | PRINTS | Plant peroxidase signature | 29 | 48 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | PRINTS | Plant peroxidase signature | 53 | 73 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | PRINTS | Plant peroxidase signature | 94 | 107 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | PRINTS | Plant peroxidase signature | 113 | 123 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | PRINTS | Plant peroxidase signature | 132 | 147 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | PRINTS | Plant peroxidase signature | 179 | 191 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | PRINTS | Plant peroxidase signature | 239 | 254 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | PRINTS | Plant peroxidase signature | 255 | 272 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | PRINTS | Plant peroxidase signature | 295 | 308 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | PANTHER | PEROXIDASE 31 | 3 | 321 | - | - | |
Cma04g02725 | 321 | Pfam | Peroxidase | 40 | 285 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cma04g02725 | 321 | Gene3D | Peroxidase, domain 2 | 158 | 300 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g02725 | Cma-Chr4:18364076 | Cma11g01161 | Cma-Chr11:6725930 | 3.61E-127 | dispersed | |
Cma10g00148 | Cma-Chr10:676861 | Cma04g02725 | Cma-Chr4:18364076 | 2.08E-123 | wgd | |
Cma11g01064 | Cma-Chr11:5836905 | Cma04g02725 | Cma-Chr4:18364076 | 2.71E-164 | wgd | |
Cma13g00904 | Cma-Chr13:7246240 | Cma04g02725 | Cma-Chr4:18364076 | 6.84E-134 | wgd | |
Cma14g00629 | Cma-Chr14:3113042 | Cma04g02725 | Cma-Chr4:18364076 | 1.74E-166 | wgd | |
Cma18g00148 | Cma-Chr18:760016 | Cma04g02725 | Cma-Chr4:18364076 | 1.46E-136 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g02725 | K00430 | - | csv:105435603 | 545.814 |