Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g02810 ATGGCGTTGGCCATAGCGATTCTAGCTCTGTTCTTGCTCCTCTGTTTTTGCTCTGCTTTGCTTCGATGGAATGAAGTTCGATACAGAAGAAAAGGGTTGCCCCATGGTACAATGGGCTGGCCTTTTTTTGGGGAGACCACTGAGTTTCTCAAACAAGGTCCTAACTTTATGAAATCCCAAAGAGCAAGGTATGGAAGCATTTTCAAGTCCCATATTTTGGGGTGTCCAACGATTGTTTCGATGGATCCTGAGGTTAATCGATATGTTTTGATGAATGAATCAAAAGGGCTTGTCCCTGGTTACCCTCAGTCCATGCTTGACATTCTTGGCAAATGCAATATTGCCGCCGTCCATGGCGGCGCTCATAAAGTCATGAGAGCTGCTCTGCTCTCTGTTGTCAGTCCCACCATGATTAGAGATCGTCTTCTTCCTAAAGTTGATGACTTTATGCGATCCCATTTGAGGAATTGGGATCAACAAATCATTGACATCCAAGAGAAGACGAAAGAGATGGCTCTACGGTCTTCTATGAAGCAGATCGCCGGAATCGAGTCCGGTCCATTATCGGAATCTTTCATCCCAGAGTTCTTTAAGCTTGTTCTCGGCACGCTCTCGCTCCCAATCGATCTTCCCGGCACGAACTACCGCCGAGGAATTCAGGCGAGGAAGAGCATCATAAAGCTGTTGCAGCAGCTGATAAACGAGAGAAGAGCCACAGAGACACAAAAGGATGACATGCTTGGATTCTTCATGAGTGAAGAGAACAAATATAAGCTAAACGATGAAGAGGTTATTGATCAAATCATCACAGTTTTGTACTCTGGCTATGAAACTGTTTCGACAACATCAATGATGGCTGTCAAGTTCCTCCATGATCATCCCAAAGTTCTTCAGCAACTAAGAGAAGAGCATTTAGCAATCAGAGAAAAGAAAAGGGCAGAGGACCCCATTGATTGGGATGATCTTAAAGCCATGAAGTTCACTCGTGCGGTGATATTCGAAACATCGAGGCTGGCCACAATTGTTAATGGGGTTTTGAGGAAAACTACAAAGGACATGGAGCTAAATGGCTTTCTCATTCCAAAAGGATGGAGGATTTATGTGTACACCAGAGAGATTAACTATGACCCTTTTCTCTATTCAGAACCATTAACCTTCAACCCATGGAGATGGCTGGACAAAAACTTGGAGTCCCATAATTACTTCTTCATCTTCGGAGGTGGAACCAGACATTGCCCTGGCAAAGAGCTGGGAATTGCAGAGATTTCTACTTTTTTACATTACTTTGTAACTAAATACAGATGGGAAGAAGTTGGAGGAGATAAGCTGTTGAAGTTTCCAAGGGTGGAAGCCCCAAGTGGGTTCCACATTAGGGTTTCATCATACTGA 1389 44.06 MALAIAILALFLLLCFCSALLRWNEVRYRRKGLPHGTMGWPFFGETTEFLKQGPNFMKSQRARYGSIFKSHILGCPTIVSMDPEVNRYVLMNESKGLVPGYPQSMLDILGKCNIAAVHGGAHKVMRAALLSVVSPTMIRDRLLPKVDDFMRSHLRNWDQQIIDIQEKTKEMALRSSMKQIAGIESGPLSESFIPEFFKLVLGTLSLPIDLPGTNYRRGIQARKSIIKLLQQLINERRATETQKDDMLGFFMSEENKYKLNDEEVIDQIITVLYSGYETVSTTSMMAVKFLHDHPKVLQQLREEHLAIREKKRAEDPIDWDDLKAMKFTRAVIFETSRLATIVNGVLRKTTKDMELNGFLIPKGWRIYVYTREINYDPFLYSEPLTFNPWRWLDKNLESHNYFFIFGGGTRHCPGKELGIAEISTFLHYFVTKYRWEEVGGDKLLKFPRVEAPSGFHIRVSSY 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18815984 18818554 + CmaCh04G028100.1 Cma04g02810 293891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g02810 462 Pfam Cytochrome P450 34 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02810 462 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02810 462 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02810 462 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02810 462 PRINTS E-class P450 group I signature 329 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02810 462 PRINTS E-class P450 group I signature 369 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02810 462 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02810 462 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02810 462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Cma04g02810 462 PANTHER CYTOCHROME P450 26 7 460 - -
Cma04g02810 462 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02810 462 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02810 462 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02810 462 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02810 462 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 460 - -
Cma04g02810 462 SUPERFAMILY Cytochrome P450 27 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02810 462 Gene3D Cytochrome P450 24 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g02810 Cma15g00224 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02810 Cma-Chr4:18815984 Cma16g01017 Cma-Chr16:7840012 6.18E-96 dispersed
Cma15g00224 Cma-Chr15:1106539 Cma04g02810 Cma-Chr4:18815984 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g02810 K09590 - csv:101206858 852.432