Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g02813 ATGATTTGCCTTCTCATTTTAATCGCTCTCAATTTCAGCTTCCTCGACCTCTCACAGGCCAGGCACCATAACAACCTCCCTTCCGCCGCTGCTGCCGTCGTCGGTACCGTCTTCTGCGACACGTGTTTTCAAGACACTTTTTCTAAGACAAGTCACTTCATTTCAGGCGCGACGGTGGCTGTCGAATGTGGCAACGAGGGATCGAACCCGAATTTTAGAGAAGAAGTAAAGACAGACAAGACAGGGGAATTCAAGATTCAGCTGCCAGTTTCAGTGAGGAAGGTTGAGGAATGTTATGTGCGGTTAATAAGAAGCAGTGAACCATATTGTGCGGTGGCTGCAAGAGCCAAATCATCATCGCTTAGGCTGAAGTCAAAAAAACAAGGCACGCATGTGTTCTCGGCTGGATTCTTCACTTTCAAGCCTCTTAAACAGCCAAAACTTTGCAGCCATAACTCACATTCTAATGAATTTGATGACACGAAACAAGTCGTCGACTTCCCGGGCTTACCGGCTCCGATCCAGAACCCGACCGTGCCGAATGTTCCTCGGATTTACGATAACCTTCCTCCTCTACCTCTTCTTCCTGGACTTCCTCCATTGCCTCAACTTCCTCCTCTCCCTCCTCTTCCACCTCTCCCTATTTTTCCATTGTTTCCACCAAAAAAGGATGATGAAAATGTACAAACTCCAAAGATAAGTCAAAACCCGGATCTGTTTCATCCACAAACTTTACTTCCAATTCCATCCTTAAAGCCTTTGAGGCCACATTTTGTTATGCCTCCACATAAGCTGCGCCACCATCCTCTCACGCATGGTCCTACACCGCCCACGGCCGCTGCCTTGGCGGCGGCAGCGGGGGGCGAGTTTCTCTGTCCTCCACCCACCCACCCACCGAAGATCGTATTCTCTTTCGGTCTTCTCTTCTCCCTCCACTTTACTGCTCTTTCCAAGATAATCGAGAATTTTAAGAGATTTGTAGGCGTTGGCACAATGGGTGCTGTCTGCTGCTGTTTGAGCATGGACGATTTTGAAGACTATGTCAATCCTAATAGTTCGGTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAATTTCTTAAATGCCTACACATTGATTTTTCGAAGAGGAGAAGTGCATCCTGTCTCTTCATCAATTCAAGGGGCAACATCCATGAGTTCTGCATCATCGACAGACAACTCTTTATCTGAAATATACCGCTCACCTCCAAGGCCATTGCCATATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGATTGATTTCTAGGCGCGAGAAGGGCTCAAGCCATTTACATGAGGAGTCAGAACCTCTAAGAGGTGAAGTAGATACAGATTCAGAATCTTTGGGCTCGGCAGGCAAATGGAATGGATCTGCTTGTCTTGACGAATCTAAAGAAAATCTTGGCAAGTCATCTCTAAAGATCCCATCAACTAAATCTACCACTGGAGCAGGGTATGCTTATACATCTTCGGAAGACGAGGATGTCTGTCCAACATGTCTTGAAGAATACACCTCAGAGAATCCCAAGATATTGACAAAATGCTGTCATCACTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGCCCAGTTTGTGGCAAGTATGGATTGAGCATAAGGACTATTCCGGATTTGCAGAACCATCGTGGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGCACCTCGGGCATAATAACCAACAGGAAGATGGGGCAAGAAATGGATATTAACGATGTGTTTGGGATGACCCAGAATAGTAGCCTGCCAAGAAAGAGTGCAATTTATGTTTGGGGTTATAATCAATCGGGCCAGACGGGTCGAAAGGGGAAGGATCATCAATTAAGGGTTCCTAGGCAGCTCCGTCCTGATCTTTTTGGATGCCCAGTGGAAGCTAATTGTCGATGGCTGGATATTGATTGTGGTCGTGAACATACGGCTGCTGTGGCTTCTGATGGGTCACTTTTTACCTGGGGTGCAAATGATTTTGGTCAACTGGGGGATGGAACTGAGGAAAAGAGCAAAGAGCCAAAGAAAGTGAAGCAATTGCAGATGGAGTTTGTGAAATCTGTTTCCTGTGGAGCACATTGTACTGCTGCTATTGCAGAACCTCGCGTGAATGATGGCACGATTTCAACTAGTAGACTCTGGATTTGGGGACAAAATCAGGGATCCAATTTGCCACGCTTATTTTGGGGAGCCTTCACACCAAACACGATTATTCGTCAAGTGTCCTGTGGGGCAGTTCATGTAGTGGCATTATCGGATGATGGGCAAATGCAAGCATGGGGCTACAATGAGTATGGTCAGCTAGGCAGGGGTGTTACATCCGAAGGTCTACAAGGAGCTCGCATTATAAGTGCTTATGCAAAGTTCCTTGATGAGGCCCCTGAGCTTGTAAAGATTACTAAAGTGTCGTGTGGGGAGTACCATTCTGCAGCTATATCTGAAAACGGCGAGGTCTATACATGGGGACTAGGAAGTATGGGTCAACTTGGTCACTGTTCCCCTCAGTCTGTGGACAAAGAGTTGATACCTCGGAGAGTTGTTGCTCTTGATGGAATATGGATAAAGGATATTGCATGTGGCGGAGTCCACACATGTGCCATTACTCAAAAAGGCTCTTTATATGCATGGGGTGGCGGTCAAGTTGGACAATTAGGTCTCGGGCCTCAGACTGGGTTTTTTTCATGTGTCGTGGGTGACTCAGAGAAGTTTCTTCGAAATCTACCTGTATTAGTTGTCCCAAATGGTGTTCTACATGTTGCTTGTGGACATTCACATACTCTTGTTTCAATGAAGGATGGAAGGATCCATGGGTGGGGTTACAATAGCTATGGCCAGGCAGCTAACGAGAAATCTACATATGCTTGGTATCCATCTCCTATTGATTGGTGTGTGGGAGAAGTGCGAAAACTAGCAGCTGGTGGTGGACATTCAGCTGTCTTAACAGACGCTTGTTCCTTGAAGGAGCTGTGTGAGTTCAGGCTTGCTGATACTGTTAACTTGCAGAATGCTTCCGAAATAGAAGATGTTGCATCCAGAACGGGATCGGATGCTTTAGCACGCCTTTGGAGTTTCTACTCGATGGCCATTGTGAATACGAAGAAGGCGAAACCAGTCATGGAAAGAAATGAAATAGAGGAAACACAGAGGACAGAAGAAGAAGAATTGAATGCAGTCTGCCAATAA 3237 46.62 MICLLILIALNFSFLDLSQARHHNNLPSAAAAVVGTVFCDTCFQDTFSKTSHFISGATVAVECGNEGSNPNFREEVKTDKTGEFKIQLPVSVRKVEECYVRLIRSSEPYCAVAARAKSSSLRLKSKKQGTHVFSAGFFTFKPLKQPKLCSHNSHSNEFDDTKQVVDFPGLPAPIQNPTVPNVPRIYDNLPPLPLLPGLPPLPQLPPLPPLPPLPIFPLFPPKKDDENVQTPKISQNPDLFHPQTLLPIPSLKPLRPHFVMPPHKLRHHPLTHGPTPPTAAALAAAAGGEFLCPPPTHPPKIVFSFGLLFSLHFTALSKIIENFKRFVGVGTMGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGATSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRGEVDTDSESLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTCLEEYTSENPKILTKCCHHFHLGCIYEWMERSDNCPVCGKYGLSIRTIPDLQNHRGGGGGGGSSSSTSGIITNRKMGQEMDINDVFGMTQNSSLPRKSAIYVWGYNQSGQTGRKGKDHQLRVPRQLRPDLFGCPVEANCRWLDIDCGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKEPKKVKQLQMEFVKSVSCGAHCTAAIAEPRVNDGTISTSRLWIWGQNQGSNLPRLFWGAFTPNTIIRQVSCGAVHVVALSDDGQMQAWGYNEYGQLGRGVTSEGLQGARIISAYAKFLDEAPELVKITKVSCGEYHSAAISENGEVYTWGLGSMGQLGHCSPQSVDKELIPRRVVALDGIWIKDIACGGVHTCAITQKGSLYAWGGGQVGQLGLGPQTGFFSCVVGDSEKFLRNLPVLVVPNGVLHVACGHSHTLVSMKDGRIHGWGYNSYGQAANEKSTYAWYPSPIDWCVGEVRKLAAGGGHSAVLTDACSLKELCEFRLADTVNLQNASEIEDVASRTGSDALARLWSFYSMAIVNTKKAKPVMERNEIEETQRTEEEELNAVCQ 1078
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18830632 18841819 - CmaCh04G028130.1 Cma04g02813 293894

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g02813 1078 PRINTS Chromosome condensation regulator RCC1 signature 670 686 IPR000408 -
Cma04g02813 1078 PRINTS Chromosome condensation regulator RCC1 signature 759 775 IPR000408 -
Cma04g02813 1078 PRINTS Chromosome condensation regulator RCC1 signature 946 967 IPR000408 -
Cma04g02813 1078 PRINTS Chromosome condensation regulator RCC1 signature 878 896 IPR000408 -
Cma04g02813 1078 PRINTS Chromosome condensation regulator RCC1 signature 775 789 IPR000408 -
Cma04g02813 1078 PANTHER UBIQUITIN-PROTEIN LIGASE E3A-RELATED 598 1041 - -
Cma04g02813 1078 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 820 830 IPR000408 -
Cma04g02813 1078 SUPERFAMILY RCC1/BLIP-II 728 1001 IPR009091 -
Cma04g02813 1078 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 485 552 IPR013083 -
Cma04g02813 1078 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN 598 1041 - -
Cma04g02813 1078 SUPERFAMILY RCC1/BLIP-II 607 790 IPR009091 -
Cma04g02813 1078 Pfam Pollen protein Ole e 1 like 33 117 - -
Cma04g02813 1078 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 773 833 IPR000408 -
Cma04g02813 1078 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 668 719 IPR000408 -
Cma04g02813 1078 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 608 667 IPR000408 -
Cma04g02813 1078 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 889 950 IPR000408 -
Cma04g02813 1078 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 951 1001 IPR000408 -
Cma04g02813 1078 Gene3D - 805 1008 IPR009091 -
Cma04g02813 1078 Gene3D - 588 804 IPR009091 -
Cma04g02813 1078 ProSiteProfiles Zinc finger RING-type profile. 508 548 IPR001841 -
Cma04g02813 1078 Pfam Regulator of chromosome condensation (RCC1) repeat 888 946 IPR000408 -
Cma04g02813 1078 Pfam Regulator of chromosome condensation (RCC1) repeat 610 664 IPR000408 -
Cma04g02813 1078 Pfam Regulator of chromosome condensation (RCC1) repeat 833 885 IPR000408 -
Cma04g02813 1078 Pfam Regulator of chromosome condensation (RCC1) repeat 667 716 IPR000408 -
Cma04g02813 1078 Pfam Regulator of chromosome condensation (RCC1) repeat 772 830 IPR000408 -
Cma04g02813 1078 SUPERFAMILY RING/U-box 503 552 - -
Cma04g02813 1078 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 834 888 IPR000408 -
Cma04g02813 1078 MobiDBLite consensus disorder prediction 387 407 - -
Cma04g02813 1078 MobiDBLite consensus disorder prediction 434 461 - -
Cma04g02813 1078 SMART ring_2 508 548 IPR001841 -
Cma04g02813 1078 MobiDBLite consensus disorder prediction 434 454 - -
Cma04g02813 1078 Pfam Ring finger domain 507 548 IPR001841 -
Cma04g02813 1078 MobiDBLite consensus disorder prediction 387 420 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g02813 - - - csv:101207094 848.195
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cma04g02813 Cma15g00221 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00326 Cma-Chr2:1595670 Cma04g02813 Cma-Chr4:18830632 9.61E-07 dispersed
Cma04g02813 Cma-Chr4:18830632 Cma07g01272 Cma-Chr7:7087477 1.09E-22 dispersed
Cma11g01524 Cma-Chr11:9961139 Cma04g02813 Cma-Chr4:18830632 3.36E-11 dispersed
Cma13g00390 Cma-Chr13:4475954 Cma04g02813 Cma-Chr4:18830632 2.07E-07 dispersed
Cma14g00735 Cma-Chr14:3681273 Cma04g02813 Cma-Chr4:18830632 8.06E-14 dispersed
Cma15g01239 Cma-Chr15:7852624 Cma04g02813 Cma-Chr4:18830632 1.22E-24 dispersed
Cma17g01425 Cma-Chr17:9389098 Cma04g02813 Cma-Chr4:18830632 2.90E-10 dispersed
Cma20g00765 Cma-Chr20:3613767 Cma04g02813 Cma-Chr4:18830632 5.16E-07 transposed
Cma01g00426 Cma-Chr1:2147308 Cma04g02813 Cma-Chr4:18830632 8.70E-40 wgd
Cma15g00221 Cma-Chr15:1097974 Cma04g02813 Cma-Chr4:18830632 1.37E-135 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi14g991 . Blo11g00325 . . . . . . . . . . . . . . Cpe13g00990 Bhi06g00313 . . . Hepe02g2108 . Lcy10g2079 Cla11g00466 Cam11g0521 Cec11g0515 Cco11g0510 Clacu11g0644 Cmu11g0503 Cre11g0983 Cone11ag0352 Cone18ag1148 . . . Csa05g03051 . . . . Bda07g01037 . . Bpe11g01184 . . . Cmo04g02944 Cmo15g00232 Cma04g02813 Cma15g00221 Car04g02713 Car15g00226 . Cpe01g02439 . . . . . . . . . . . . . . Lsi03g00188 . Chy09g00182 Cme09g00197
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cma12g00993 . 84 570 C3H Transcription Factor Family AT2G31510 76.2 1.7e-230 795.8
Cma08g00211 . 72 559 C3H Transcription Factor Family AT2G31510 75.9 6.9e-227 783.9
Cma17g00596 . 102 606 C3H Transcription Factor Family AT2G31510 73.3 7.1e-224 773.9
Cma08g00211 . 55 531 C3H Transcription Factor Family AT2G31770 58.5 2.9e-170 595.9
Cma12g00993 . 53 529 C3H Transcription Factor Family AT2G31770 58.1 8.5e-170 594.3
Cma17g00596 . 86 564 C3H Transcription Factor Family AT2G31770 57.6 2.2e-165 579.7
Cma12g00993 . 67 529 C3H Transcription Factor Family AT2G31760 59.1 2.0e-168 589.7
Cma08g00211 . 55 524 C3H Transcription Factor Family AT2G31760 57.8 2.4e-166 582.8
Cma17g00596 . 86 571 C3H Transcription Factor Family AT2G31760 55.9 9.6e-163 570.9
Cma02g01617 . 1 193 C3H Transcription Factor Family AT3G03550 51.2 1.3e-49 194.5
Cma03g01117 . 792 953 C3H Transcription Factor Family AT5G06490 50.3 2.0e-44 176.4
Cma03g01117 . 792 953 C3H Transcription Factor Family AT5G06490 50.3 2.0e-44 176.4
Cma15g00221 CST 1 226 C3H Transcription Factor Family AT3G02290 61.1 2.9e-74 275.8
Cma04g02813 CST 332 550 C3H Transcription Factor Family AT3G02290 60.4 1.3e-71 266.9
Cma11g00552 . 1 306 C3H Transcription Factor Family AT1G11020 75.3 8.1e-136 480.7
Cma10g00580 . 1 302 C3H Transcription Factor Family AT1G11020 75.9 7.6e-134 474.2
Cma14g01188 . 59 218 C3H Transcription Factor Family AT1G50440 75.6 3.1e-68 255.8
Cma01g00002 . 28 209 C3H Transcription Factor Family AT1G50440 66.1 8.4e-66 247.7
Cma03g00037 . 8 369 C3H Transcription Factor Family AT5G08750 60.5 1.0e-118 424.1
Cma07g01264 . 1 353 C3H Transcription Factor Family AT5G08750 61.7 1.8e-115 413.3
Cma16g00245 . 7 532 C3H Transcription Factor Family AT3G16090 63.2 4.8e-172 601.7
Cma04g00386 . 1 533 C3H Transcription Factor Family AT3G16090 62.7 7.0e-171 597.8
Cma01g00933 . 31 185 C3H Transcription Factor Family AT1G22510 69.0 9.6e-58 220.7
Cma15g00221 CST 1 225 C3H Transcription Factor Family AT5G38895 57.1 2.3e-72 270.0
Cma04g02813 CST 332 550 C3H Transcription Factor Family AT5G38895 55.9 1.2e-68 257.7
Cma05g00220 . 37 243 C3H Transcription Factor Family AT1G19310 67.3 1.4e-78 290.0
Cma12g00497 CCT,CST,ECH 16 193 C3H Transcription Factor Family AT1G19310 70.8 2.6e-72 269.2
Cma03g01031 . 74 283 C3H Transcription Factor Family AT1G19310 59.4 6.1e-69 258.1
Cma07g00752 . 19 221 C3H Transcription Factor Family AT1G19310 58.8 1.4e-65 246.9
Cma01g00933 . 35 185 C3H Transcription Factor Family AT1G72175 69.5 2.8e-54 208.8
Cma14g02047 . 1 188 C3H Transcription Factor Family AT4G00335 50.8 7.2e-47 184.5
Cma03g00789 . 3 254 C3H Transcription Factor Family AT2G22120 82.6 3.1e-123 439.1
Cma05g00467 . 71 178 C3H Transcription Factor Family AT5G07040 65.7 1.3e-38 156.8
Cma11g00257 CST 1 389 C3H Transcription Factor Family AT1G18470 76.1 1.5e-177 619.8
Cma10g00248 CST 61 420 C3H Transcription Factor Family AT1G18470 67.4 8.5e-141 497.7
Cma04g02006 . 11 362 C3H Transcription Factor Family AT1G18470 54.2 7.0e-111 398.3
Cma19g00468 CST 127 281 C3H Transcription Factor Family AT4G33565 53.1 5.6e-40 162.5
Cma15g00931 . 67 300 C3H Transcription Factor Family AT1G68200 50.2 2.0e-51 200.3
Cma08g00211 . 55 531 C3H Transcription Factor Family AT2G31770 58.5 2.9e-170 595.9
Cma12g00993 . 53 529 C3H Transcription Factor Family AT2G31770 58.1 8.5e-170 594.3
Cma17g00596 . 86 564 C3H Transcription Factor Family AT2G31770 57.6 2.2e-165 579.7
Cma12g00993 . 67 529 C3H Transcription Factor Family AT2G31760 59.1 2.0e-168 589.7
Cma08g00211 . 55 524 C3H Transcription Factor Family AT2G31760 57.8 2.4e-166 582.8
Cma17g00596 . 86 571 C3H Transcription Factor Family AT2G31760 55.9 9.6e-163 570.9
Cma09g01026 CST 45 272 C3H Transcription Factor Family AT5G55970 69.0 2.9e-93 339.3
Cma01g01063 CST 20 276 C3H Transcription Factor Family AT5G55970 60.5 3.9e-90 328.9
Cma09g01025 . 32 272 C3H Transcription Factor Family AT5G55970 63.9 2.0e-89 326.6
Cma03g00037 . 8 369 C3H Transcription Factor Family AT5G63780 58.2 8.5e-113 404.4
Cma07g01264 . 1 353 C3H Transcription Factor Family AT5G63780 55.7 1.7e-105 380.2
Cma06g00107 . 1 423 C3H Transcription Factor Family AT3G58030 53.1 1.1e-106 384.4
Cma14g00411 . 53 464 C3H Transcription Factor Family AT3G58030 51.4 3.8e-96 349.4
Cma09g01026 CST 38 336 C3H Transcription Factor Family AT4G26580 62.7 1.1e-111 400.6
Cma01g01063 CST 35 343 C3H Transcription Factor Family AT4G26580 61.4 1.9e-111 399.8
Cma09g01025 . 41 340 C3H Transcription Factor Family AT4G26580 63.3 2.1e-110 396.4
Cma09g01201 . 8 143 C3H Transcription Factor Family AT4G10150 56.4 1.2e-43 174.1
Cma04g01053 . 107 589 C3H Transcription Factor Family AT5G01960 58.1 1.1e-148 523.9
Cma04g00096 . 1 482 C3H Transcription Factor Family AT5G01960 56.7 9.4e-148 520.8
Cma07g01198 CST 17 415 C3H Transcription Factor Family AT5G01960 65.4 2.6e-129 459.5
Cma03g00274 CST 11 407 C3H Transcription Factor Family AT5G01960 65.6 5.4e-127 451.8
Cma02g00241 CST 1 151 C3H Transcription Factor Family AT2G04240 58.0 5.3e-43 171.4
Cma20g00706 CST 134 287 C3H Transcription Factor Family AT2G04240 55.6 1.0e-41 167.2
Cma02g01275 CST 15 243 C3H Transcription Factor Family AT5G19430 56.6 1.2e-65 247.3
Cma20g00110 CST 15 237 C3H Transcription Factor Family AT5G19430 55.0 2.1e-62 236.5
Cma16g00511 . 134 567 C3H Transcription Factor Family AT5G45290 51.5 3.1e-95 346.7
Cma20g00110 CST 17 237 C3H Transcription Factor Family AT5G12310 52.9 3.5e-57 219.2
Cma02g01275 CST 17 243 C3H Transcription Factor Family AT5G12310 53.9 3.5e-57 219.2
Cma11g00340 . 78 373 C3H Transcription Factor Family AT5G05810 52.0 2.3e-74 276.9
Cma04g02928 CST 12 215 C3H Transcription Factor Family AT5G05830 56.9 7.4e-58 221.1
Cma06g00260 CCT,CST,ECH 71 232 C3H Transcription Factor Family AT5G05830 63.6 2.8e-57 219.2
Cma14g00100 CCT,CST,ECH 70 231 C3H Transcription Factor Family AT5G05830 59.9 5.0e-54 208.4
Cma07g01034 CCT,ECH 33 159 C3H Transcription Factor Family AT5G05830 62.0 1.6e-39 160.2
Cma15g00118 CST 57 192 C3H Transcription Factor Family AT5G05830 55.3 1.7e-38 156.8
Cma15g00221 CST 1 226 C3H Transcription Factor Family AT5G15790 60.1 2.1e-72 269.6
Cma04g02813 CST 332 550 C3H Transcription Factor Family AT5G15790 59.7 5.1e-71 265.0
Cma15g00098 CST 1 272 C3H Transcription Factor Family AT3G55530 80.2 6.7e-115 411.0
Cma04g02947 CST 1 257 C3H Transcription Factor Family AT3G55530 74.7 1.5e-101 366.7
Cma08g00363 . 1 273 C3H Transcription Factor Family AT1G63900 74.1 8.9e-115 410.6
Cma06g01221 . 10 393 C3H Transcription Factor Family AT2G44580 52.8 3.9e-116 415.6
Cma05g00220 . 41 166 C3H Transcription Factor Family AT1G74990 60.6 7.2e-41 164.1
Cma12g00497 CCT,CST,ECH 25 150 C3H Transcription Factor Family AT1G74990 60.9 3.6e-40 161.8
Cma07g00752 . 10 145 C3H Transcription Factor Family AT1G74990 52.1 1.1e-36 150.2
Cma01g01688 CCT 436 736 C3H Transcription Factor Family AT5G20910 60.0 3.9e-95 345.5
Cma16g00245 . 125 525 C3H Transcription Factor Family AT1G65040 56.6 2.5e-113 406.0
Cma04g00386 . 119 532 C3H Transcription Factor Family AT1G65040 53.6 8.7e-106 380.9
Cma03g01031 . 75 285 C3H Transcription Factor Family AT2G23780 62.1 9.7e-75 277.3
Cma07g00752 . 8 223 C3H Transcription Factor Family AT2G23780 57.8 2.5e-70 262.7
Cma05g00220 . 22 245 C3H Transcription Factor Family AT2G23780 56.5 5.1e-68 255.0
Cma12g00497 CCT,CST,ECH 6 191 C3H Transcription Factor Family AT2G23780 61.1 3.2e-62 235.7
Cma14g00506 CCT 1 317 C3H Transcription Factor Family AT3G10810 52.4 1.1e-78 291.6
Cma02g01434 . 1 170 C3H Transcription Factor Family AT1G63840 57.8 3.1e-46 182.2
Cma08g00893 . 41 189 C3H Transcription Factor Family AT1G63840 52.9 2.7e-42 169.1
Cma15g00981 . 34 345 C3H Transcription Factor Family AT1G68070 67.3 3.7e-118 422.2
Cma04g02103 . 8 347 C3H Transcription Factor Family AT1G68070 64.0 1.4e-114 410.2
Cma16g01019 . 47 376 C3H Transcription Factor Family AT1G68070 50.3 4.1e-85 312.4
Cma09g00033 CST 4 180 C3H Transcription Factor Family AT1G76410 55.9 6.1e-51 198.0
Cma06g00169 . 30 163 C3H Transcription Factor Family AT1G76410 61.2 5.2e-42 168.3
Cma05g00645 . 95 504 C3H Transcription Factor Family AT1G80400 54.4 1.0e-111 401.0
Cma12g00304 . 1 411 C3H Transcription Factor Family AT1G80400 51.3 7.0e-108 388.3
Cma06g00169 . 25 160 C3H Transcription Factor Family AT2G17450 60.7 8.3e-40 161.0
Cma12g00993 . 84 570 C3H Transcription Factor Family AT2G31510 76.2 1.7e-230 795.8
Cma08g00211 . 72 559 C3H Transcription Factor Family AT2G31510 75.9 6.9e-227 783.9
Cma17g00596 . 102 606 C3H Transcription Factor Family AT2G31510 73.3 7.1e-224 773.9
Cma03g01117 . 771 952 C3H Transcription Factor Family AT2G35910 58.3 1.5e-53 206.8
Cma14g00369 . 1 163 C3H Transcription Factor Family AT2G35910 52.1 7.2e-43 171.4
Cma07g01290 . 1 306 C3H Transcription Factor Family AT2G41980 80.5 2.1e-149 525.8
Cma03g00101 . 1 283 C3H Transcription Factor Family AT2G41980 85.5 1.3e-146 516.5
Cma18g01332 . 653 910 C3H Transcription Factor Family AT2G41980 80.6 1.2e-128 456.8
Cma18g00866 . 31 305 C3H Transcription Factor Family AT2G41980 75.1 1.2e-125 446.8
Cma04g01338 . 48 305 C3H Transcription Factor Family AT2G41980 79.5 1.6e-125 446.4
Cma15g00822 . 893 1150 C3H Transcription Factor Family AT2G41980 78.7 3.6e-125 445.3
Cma17g00559 . 43 301 C3H Transcription Factor Family AT2G41980 75.7 5.8e-123 438.0
Cma04g02211 . 114 371 C3H Transcription Factor Family AT2G41980 77.1 2.4e-121 432.6
Cma08g00110 . 44 302 C3H Transcription Factor Family AT2G41980 73.4 4.6e-120 428.3
Cma16g00047 . 631 926 C3H Transcription Factor Family AT2G41980 66.4 3.9e-111 398.7
Cma06g01434 CST 107 380 C3H Transcription Factor Family AT3G06140 61.2 9.5e-93 337.8
Cma14g01676 CST 119 392 C3H Transcription Factor Family AT3G06140 61.5 1.4e-91 334.0
Cma06g00374 CST 33 329 C3H Transcription Factor Family AT3G09770 59.0 1.4e-85 313.9
Cma14g00207 CST 34 331 C3H Transcription Factor Family AT3G09770 58.2 9.1e-85 311.2
Cma11g01553 . 132 698 C3H Transcription Factor Family AT3G26730 53.9 3.0e-162 569.7
Cma10g00129 CST 58 351 C3H Transcription Factor Family AT3G47990 71.7 1.6e-125 446.4
Cma11g00101 CST 58 369 C3H Transcription Factor Family AT3G47990 67.6 3.7e-122 435.3
Cma09g00033 CST 4 180 C3H Transcription Factor Family AT1G20823 58.4 1.0e-51 200.7
Cma06g00169 . 28 163 C3H Transcription Factor Family AT1G20823 64.4 2.0e-44 176.4
Cma20g00876 . 41 413 C3H Transcription Factor Family AT3G18930 54.8 6.4e-85 312.0
Cma16g01253 . 20 235 C3H Transcription Factor Family AT5G66070 73.6 1.9e-75 279.6
Cma06g00134 . 59 274 C3H Transcription Factor Family AT5G66070 73.1 2.7e-74 275.8
Cma06g00336 . 8 272 C3H Transcription Factor Family AT5G02750 53.1 1.6e-66 250.4
Cma11g00257 CST 5 467 C3H Transcription Factor Family AT1G73950 71.1 1.5e-188 656.4
Cma10g00248 CST 61 498 C3H Transcription Factor Family AT1G73950 65.6 3.5e-166 582.0
Cma04g02006 . 12 440 C3H Transcription Factor Family AT1G73950 52.4 1.5e-127 453.8
Cma09g01201 . 3 144 C3H Transcription Factor Family AT1G33480 59.2 2.7e-44 176.4
Cma15g00981 . 2 243 C3H Transcription Factor Family AT2G01735 59.0 1.7e-72 270.0
Cma04g02103 . 2 244 C3H Transcription Factor Family AT2G01735 58.1 8.5e-72 267.7
Cma06g00724 . 60 269 C3H Transcription Factor Family AT2G01735 55.2 4.7e-54 208.8
Cma16g01019 . 60 269 C3H Transcription Factor Family AT2G01735 54.5 2.6e-52 203.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012441 1 1 1 0 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 0 2 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma04g02813 Cma_Chr04 FPKM 11.065789 11.294699 11.770745 11.767114 17.827423 19.078979 17.953737 9.675722 10.152838 10.518693