Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g02842 ATGCAGCTGAAATTGGCTTCGAATTTGCCCACGATTTCCTCCATTGAAGATCCTAATACTCCAATTCTTTCCCCCACTATCTCATCAGCTGAAGAACTAATGGCGGTTCCCGCGGTTCAGTTCCCGATCTTCATGGCCGTGAGAGTGCTCGGGATGGTTGTGGCAACTCTCGTCTTCATTTGGACCTTGCACTTCCGTGGAGGATTGGCGCTTATCTCAGATAACAAGGATCTCATCTTCAATGTCCATCCTGTTCTTATGGTCATTGGACTCATACTTCTAAATGGTGAAGCAATGTTGGCATACAAGACAGTCTCAGGAACCAAAAATTTCAGAAAACTAGTTCATCTTGCAGTACAGTTTGTTGCATTCTGTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTCCACAACGACAAAGGAATCGAGAACTTTTACAGTTTGCATTCATGGTTGGGTCTAGTTTCGATCTTTCTGTTCGGCTTCCAGTGGACTGCAGGATTTGTAACCTTTTGGTACCCAGGCGGCTCCAGAAACAGCAGATCGACTCTATTGCCATGGCATGTTTTCTTTGGTGTTTACATATATGGCCTTTCCATTGCTACAGCTGTTACTGGCTTGTTAGAAAAAGCTACATTTCTTCAAGTCAGCAAGGTGATTTTACGCTATTCCAACGAGGCGTTGCTGTTAAATTCGTTGGGTCTCCTCATTGTTCTTCTGGGTGGTCTTGTAATTCTCGCTGTTATCGCTCCATCGAGTAGCAAAGGTGACATTTTCAGGGGGCCAGCAGAATAG 798 44.99 MQLKLASNLPTISSIEDPNTPILSPTISSAEELMAVPAVQFPIFMAVRVLGMVVATLVFIWTLHFRGGLALISDNKDLIFNVHPVLMVIGLILLNGEAMLAYKTVSGTKNFRKLVHLAVQFVAFCLSLIGIWAALKFHNDKGIENFYSLHSWLGLVSIFLFGFQWTAGFVTFWYPGGSRNSRSTLLPWHVFFGVYIYGLSIATAVTGLLEKATFLQVSKVILRYSNEALLLNSLGLLIVLLGGLVILAVIAPSSSKGDIFRGPAE 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18985478 18988845 + CmaCh04G028420.1 Cma04g02842 293923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g02842 265 PANTHER CYTOCHROME B561-RELATED 34 261 IPR043205 GO:0016491
Cma04g02842 265 CDD Cyt_b561_ACYB-1_like 73 216 - -
Cma04g02842 265 Gene3D - 34 262 - -
Cma04g02842 265 ProSiteProfiles Cytochrome b561 domain profile. 46 250 IPR006593 -
Cma04g02842 265 PANTHER B561, PUTATIVE-RELATED 34 261 - -
Cma04g02842 265 Pfam Eukaryotic cytochrome b561 82 214 IPR006593 -
Cma04g02842 265 SMART 561_7 82 208 IPR006593 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g02842 Cma15g00193 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02147 Cma-Chr4:15012724 Cma04g02842 Cma-Chr4:18985478 3.29E-53 dispersed
Cma04g02842 Cma-Chr4:18985478 Cma19g00416 Cma-Chr19:5015093 1.53E-67 dispersed
Cma15g00193 Cma-Chr15:931475 Cma04g02842 Cma-Chr4:18985478 2.47E-139 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g02842 K08360 - csv:101212633 397.897