Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma04g02842 | ATGCAGCTGAAATTGGCTTCGAATTTGCCCACGATTTCCTCCATTGAAGATCCTAATACTCCAATTCTTTCCCCCACTATCTCATCAGCTGAAGAACTAATGGCGGTTCCCGCGGTTCAGTTCCCGATCTTCATGGCCGTGAGAGTGCTCGGGATGGTTGTGGCAACTCTCGTCTTCATTTGGACCTTGCACTTCCGTGGAGGATTGGCGCTTATCTCAGATAACAAGGATCTCATCTTCAATGTCCATCCTGTTCTTATGGTCATTGGACTCATACTTCTAAATGGTGAAGCAATGTTGGCATACAAGACAGTCTCAGGAACCAAAAATTTCAGAAAACTAGTTCATCTTGCAGTACAGTTTGTTGCATTCTGTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTCCACAACGACAAAGGAATCGAGAACTTTTACAGTTTGCATTCATGGTTGGGTCTAGTTTCGATCTTTCTGTTCGGCTTCCAGTGGACTGCAGGATTTGTAACCTTTTGGTACCCAGGCGGCTCCAGAAACAGCAGATCGACTCTATTGCCATGGCATGTTTTCTTTGGTGTTTACATATATGGCCTTTCCATTGCTACAGCTGTTACTGGCTTGTTAGAAAAAGCTACATTTCTTCAAGTCAGCAAGGTGATTTTACGCTATTCCAACGAGGCGTTGCTGTTAAATTCGTTGGGTCTCCTCATTGTTCTTCTGGGTGGTCTTGTAATTCTCGCTGTTATCGCTCCATCGAGTAGCAAAGGTGACATTTTCAGGGGGCCAGCAGAATAG | 798 | 44.99 | MQLKLASNLPTISSIEDPNTPILSPTISSAEELMAVPAVQFPIFMAVRVLGMVVATLVFIWTLHFRGGLALISDNKDLIFNVHPVLMVIGLILLNGEAMLAYKTVSGTKNFRKLVHLAVQFVAFCLSLIGIWAALKFHNDKGIENFYSLHSWLGLVSIFLFGFQWTAGFVTFWYPGGSRNSRSTLLPWHVFFGVYIYGLSIATAVTGLLEKATFLQVSKVILRYSNEALLLNSLGLLIVLLGGLVILAVIAPSSSKGDIFRGPAE | 265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 18985478 | 18988845 | + | CmaCh04G028420.1 | Cma04g02842 | 293923 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma04g02842 | 265 | PANTHER | CYTOCHROME B561-RELATED | 34 | 261 | IPR043205 | GO:0016491 | |
Cma04g02842 | 265 | CDD | Cyt_b561_ACYB-1_like | 73 | 216 | - | - | |
Cma04g02842 | 265 | Gene3D | - | 34 | 262 | - | - | |
Cma04g02842 | 265 | ProSiteProfiles | Cytochrome b561 domain profile. | 46 | 250 | IPR006593 | - | |
Cma04g02842 | 265 | PANTHER | B561, PUTATIVE-RELATED | 34 | 261 | - | - | |
Cma04g02842 | 265 | Pfam | Eukaryotic cytochrome b561 | 82 | 214 | IPR006593 | - | |
Cma04g02842 | 265 | SMART | 561_7 | 82 | 208 | IPR006593 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma04g02842 | Cma15g00193 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g02147 | Cma-Chr4:15012724 | Cma04g02842 | Cma-Chr4:18985478 | 3.29E-53 | dispersed | |
Cma04g02842 | Cma-Chr4:18985478 | Cma19g00416 | Cma-Chr19:5015093 | 1.53E-67 | dispersed | |
Cma15g00193 | Cma-Chr15:931475 | Cma04g02842 | Cma-Chr4:18985478 | 2.47E-139 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma04g02842 | K08360 | - | csv:101212633 | 397.897 |