Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g02857 ATGGCGGCCTTTATTTTGCCGCTGGTTATTACAACTCTGGCTCTAGCAGCGACGTCGTTTGTCATCTTATCTGTGTTATACGACGCCGTTTCCTGCTACTGGTCGACTCCTAGACGCATCAAGAAAAAGATGGCTATGCAAGGTGTGGGTGGCCCCAAACCCCGCCCTTTCCTCGGCAACATCCTTGACGTCACCGCCCTCCTCTCCAAGTCCACCTCCCAAGACATGCCCTCCATCTCCCACGACCTCGTCCCCCGCCTCCTCCCGCACTATCTCGTCTGGACCGCCCAATTCGGGAAGAGATTTATATTTTGGAATGGGATTGAGCCAAGAATGTGTCTGGCTGAAACCGACTTGATCAAAGAGCTTTTGTCCAAACACAGCGCCGTTACCGGCAAGTCGTGGCTCCAACAACAGGGGTCCAGCCACTTTATTGGTAGAGGTCTCTTAATGGCCAACGGCCAAAACTGGTTCCATCAACGACATGTCGTCGCTCCCGCCTTCCTCGGCAACCGTCTCAAGAGTTACGCAGGATGCATGGTTGAATGCACGAGAGAAATGCTTATATCATTAGAAAACGAGGTCAAATTGGGACGAACCGAGTTCGAGATCGGCGAGTACATGACCAGAATCACGGCCGATATAATTTCCAAAACCGAGTTTGGAAGCAGCTATGAAAAGGGAAAACAAATCTTTCATTTACTCACGACTCTACAGAATCTCTGTGCTCAAGCTAGCCGCCACCTCTGCCTTCCCGGTAGCAGATTTTTTCCGAGTAAATATAACAGAGAAATAAAGGCATTAAAAGGGAAAGTGGAGGGATTGTTAATGGAGATCATAGAGAGCAGAAAGGAGTGTGTGGAGAATGGTAATGATTTATTAGGAATGTTGCTGAATGAGATGCAGAATAAACGAGACAACAAGGGTTTTAATTTGAATTTGCAAATAATAATGGATGAATGCAAGACCTTCTTCTTTGCCGGCCATGAAACCACAGCTCTCTTGCTCACTTGGACTCTCATGTTATTAGCCACCAACCCTTCTTGGCAAGACAAGGTTCGAGCTGAAGTCATGGCCGTCTGCAACCGCCAAGCTCCCTCGCTCGACCATCTCCCCAAACTCTCCCAGCTTAGTATGGTGATAAATGAATCCCTGAGGTTATACCCGCCAGCGAGCATTCTTCCAAGGATAGCGTTTGAGGATATAAAGCTCGGGGACTTAGAGATCCCAAAAGGGTTGTCGATATGGATCCCAGTGCTAGCCATTCACCACAGTGAGGAGCTATGGGGAAAAGACGCGAATGAGTTCAAGCCTGAAAGATTTGGGAGCTCGAAGGTGTTCACGTCGGGTAGGTTCATACCGTTTGCTTCTGGACCGCGCAACTGCGTCGGCCAATCTTTCGCTGTCATGGAAACGAAGATCATATTGGCCATGCTCATCGCCAAGTTTTCGTTCGCCATCTCCCAAAACTATCGCCATGCACCCGTCGTTGTGCTCACTATCAAACCTAAATATGGTGTTCAAGTTTGCTTGACCCCTTTGAATTAA 1548 48.51 MAAFILPLVITTLALAATSFVILSVLYDAVSCYWSTPRRIKKKMAMQGVGGPKPRPFLGNILDVTALLSKSTSQDMPSISHDLVPRLLPHYLVWTAQFGKRFIFWNGIEPRMCLAETDLIKELLSKHSAVTGKSWLQQQGSSHFIGRGLLMANGQNWFHQRHVVAPAFLGNRLKSYAGCMVECTREMLISLENEVKLGRTEFEIGEYMTRITADIISKTEFGSSYEKGKQIFHLLTTLQNLCAQASRHLCLPGSRFFPSKYNREIKALKGKVEGLLMEIIESRKECVENGNDLLGMLLNEMQNKRDNKGFNLNLQIIMDECKTFFFAGHETTALLLTWTLMLLATNPSWQDKVRAEVMAVCNRQAPSLDHLPKLSQLSMVINESLRLYPPASILPRIAFEDIKLGDLEIPKGLSIWIPVLAIHHSEELWGKDANEFKPERFGSSKVFTSGRFIPFASGPRNCVGQSFAVMETKIILAMLIAKFSFAISQNYRHAPVVVLTIKPKYGVQVCLTPLN 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19043955 19045805 - CmaCh04G028570.1 Cma04g02857 293938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g02857 515 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02857 515 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02857 515 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02857 515 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02857 515 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02857 515 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02857 515 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02857 515 Pfam Cytochrome P450 97 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02857 515 Gene3D Cytochrome P450 33 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02857 515 SUPERFAMILY Cytochrome P450 51 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02857 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 510 - -
Cma04g02857 515 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02857 515 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02857 515 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02857 515 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma04g02857 515 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 510 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02857 Cma-Chr4:19043955 Cma14g00810 Cma-Chr14:4097468 0 dispersed
Cma15g00184 Cma-Chr15:848309 Cma04g02857 Cma-Chr4:19043955 0 wgd
Cma04g00093 Cma-Chr4:468269 Cma04g02857 Cma-Chr4:19043955 9.08E-08 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g02857 K10717 - csv:101215037 863.603