Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g02924 ATGGTGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGCTGTCCGGCATTGTGCTACTTCTTCAGGGTATAACGAGTCCAAGTTGGCGGCTATTATGGCGTCATTCATCATTCAGAAACCTCGGCAAAGGTCGCCTTTCATCAAAGCTGCCCTAAAAACGCTTGAGAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAGCATCAAAAAGACTACGTAGATATGTATCGCACAACAGATCAAGAGAGAGACAATATTGAACATGAGGTAACTGCATTCATCAAAGCATGCCAAGAACAAATCGATATCCTAAAAAACAACATTAATGAGGATGATGCACACTCAAAGAGCTGGCTTGGTGCTAGGACTGATGATGCTAATGCCGATACTATTGCACACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTCCATTCAGTAACATCACAATTTGATAAGCTAAGAGCCATTCGGTTTCAAGATATAATAAACAAAGCAGTACCAAGAAGAAAACCCAACCAAGTAAATAAACCACGTTCTGCAAATGCCCCCAACTATAATAATATGGAGCTGAGGGAACCTGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAGCAACTGTTGGATGATGAAACTCGTGCACTTCAGGTTGAGTTGACCAGTCTTCTTGATGCAGTCCAGGAAGCAGAAACTAAGATGGTAGAGATGTCTGCTTTAAATCACCTAATGTCTACACATGTTTTGCAGCAAGCACAACAAATCGAATTTCTTTATGAACAGGCTGTTGAAGCTACAAAGAACGTCGAGCTTGGTAATAAAGAACTTGCCCACGCAATTCAGCGGAATAGCAGCAGTAGAACCTTCCTTCTGCTCTTTCTATTTGTGCTAACATTTTCAATTCTCTTTCTTGATTGGTATAGTTGA 930 40.86 MVKFRDRTEDFKDAVRHCATSSGYNESKLAAIMASFIIQKPRQRSPFIKAALKTLESIGALEEFMLKHQKDYVDMYRTTDQERDNIEHEVTAFIKACQEQIDILKNNINEDDAHSKSWLGARTDDANADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVNKPRSANAPNYNNMELREPDNFEHQPVRAQQQLLDDETRALQVELTSLLDAVQEAETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELAHAIQRNSSSRTFLLLFLFVLTFSILFLDWYS 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19310623 19313870 - CmaCh04G029240.1 Cma04g02924 294005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g02924 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Cma04g02924 309 PANTHER SYNTAXIN-18 5 309 - -
Cma04g02924 309 PANTHER SYNTAXIN-18 5 309 - -
Cma04g02924 309 SUPERFAMILY t-snare proteins 61 273 IPR010989 GO:0016020|GO:0016192
Cma04g02924 309 MobiDBLite consensus disorder prediction 176 190 - -
Cma04g02924 309 MobiDBLite consensus disorder prediction 171 193 - -
Cma04g02924 309 Gene3D - 211 306 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g02924 Cma15g00119 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02924 Cma-Chr4:19310623 Cma15g00119 Cma-Chr15:551441 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g02924 K08492 - csv:101207161 553.518