Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma04g02976 ATGGGTCGGGTGAATGAGAAGCTTGTGGCCTTTTTGAACAACCGATGGTTGGTTTTTGTGGCTGCAATATGGGTACAATCTTGCGCCGGAATTGGGTATCTTTTCGGAAGCATATCGCCGGTGATCAAGACGAATTTGAGTTATAATCAGAAGCAAATTGCGCGGCTCGGTGTCGCGAAGGATCTTGGCGATAGCGTTGGCATTTTGGCCGGAACCTTGTCGGAGATATTGCCGTTCTGGGGAACTTTATTAGTCGGTGCTCTCAATAACTTTATTGGGTATGGTTGGGTTTGGCTCATCGTCACTGGTCGAGCTCCTGTTTTGCCTCTCTGGGCTATGTGCGTTCTTGTGTTTGTGGGAACGAATGGGGAGACATACTTCAACACAGTTTCTTTGGTTTCTTGCGTACAAAACTTTCCGAAGAGTAGGGGTCCGGTGGTAGGGATCTTGAAAGGCTTTGCTGGTTTAAGTGGTGCAATTTTGACTCAAATATATGCAATCATGCATTTCCCTGATTCAGCCAATCTTATTTTCATGATAGCAGTAGGTCCTGCTCTTGTGGCTATTGGTATGATGTTCTTTATCCGACCCGTTGCTGGTCATCGACAAGTGAGGCCGTCCGATGGCATGAGCTTTAGTAGTGTTTATGGTGTCTGCCTCCTTTTGGCTGCATATCTAATGGGAGTCATGCTTGTTGAGGATCTTGTTGATTTGAGCCCCACTGTGATAGCCATTTTCACTGCTGTTATGTTTGTTATCCTTCTTACTCCCTTTTTGATTCCTGTGATATTGACTTTTAGCTCGGAAACAATGGCGTATCCCGAGCAAGAGGCTCTCTTGCAACAGTCACCTAAACAGGAGCCTGCTAGATCTGAACCAGATGGTCATGAAGTGATATTTAGTGAGGTCGAAGATGAAAAATCGGAGGGAGAGGACTTACTCCCTGCATTGGAGCGACAAAAACGCATTGCTCAGTTGCAAGCAAGACTATTGCAGGCAGCTGCAGAAGGAGCAGTACGAGTCAAGAGGAGGAAGGGTCCTCGTAGAGGGGAGGACTTTACTTTGGGTCAAGCTTTGATCAAAGCAGACTTTTGGCTTATATTCTTCTCCCTTCTCCTTGGCTCTGGAACTGGGTTGACCGTGATCGATAACCTCGGACAGATGAGTCAGTCTTTAGGCTATGATAATACGCATATTTTTGTATCCCTGATCAGCATATGGAACTTTCTTGGCCGGGTTGGTGGCGGTTACTTCTCTGAGATCGTTGTGAGAGATTATGCTTATCCAAGGCCCATTGCTATGGCAACTGCACAATTCCTTATGATATTTGGGCATATCTTCATCGGTATGGGATGGCCCGGGGCAATGTACATTGGCACACTCATCACGGGGCTCGGATACGGGGCTCACTGGGCAATTGTGCCTGCTACTGCCTCGGAGTTGTTTGGGTTGAAAAAGTTCGGGGCTTTATACAACTTCCTGACTCTCTCAACTCCGATGGGATCTCTGATATTTTCGGGCCTAATTGCGAGCAGTATATATGATAGTGAAGCAGAGAAGCAAGCACATAATGGTCTCTCACAGCTGCAGAGCTCCTCATCAGTTTGGTTCAGCAGACTTCATGTCGATGCACCGCTCAAGTGCGACGGTGCTATATGTTTCTTTCTAACTTGTATGATAATGGCTGGATTCTGTGCTATTGCAGGCATGTTAAGTTTGATTTTGGTGCACCGGACAAAAGGTGTGTACTACAACCTGTACGGAAAATCCCGAGCTTCGACGCTCTCCTAG 1791 46.73 MGRVNEKLVAFLNNRWLVFVAAIWVQSCAGIGYLFGSISPVIKTNLSYNQKQIARLGVAKDLGDSVGILAGTLSEILPFWGTLLVGALNNFIGYGWVWLIVTGRAPVLPLWAMCVLVFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIMHFPDSANLIFMIAVGPALVAIGMMFFIRPVAGHRQVRPSDGMSFSSVYGVCLLLAAYLMGVMLVEDLVDLSPTVIAIFTAVMFVILLTPFLIPVILTFSSETMAYPEQEALLQQSPKQEPARSEPDGHEVIFSEVEDEKSEGEDLLPALERQKRIAQLQARLLQAAAEGAVRVKRRKGPRRGEDFTLGQALIKADFWLIFFSLLLGSGTGLTVIDNLGQMSQSLGYDNTHIFVSLISIWNFLGRVGGGYFSEIVVRDYAYPRPIAMATAQFLMIFGHIFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFGALYNFLTLSTPMGSLIFSGLIASSIYDSEAEKQAHNGLSQLQSSSSVWFSRLHVDAPLKCDGAICFFLTCMIMAGFCAIAGMLSLILVHRTKGVYYNLYGKSRASTLS 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19524017 19526647 - CmaCh04G029760.1 Cma04g02976 294057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma04g02976 596 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Cma04g02976 596 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 3 591 - -
Cma04g02976 596 CDD MFS_Mch1p_like 15 568 - -
Cma04g02976 596 SUPERFAMILY MFS general substrate transporter 212 581 IPR036259 -
Cma04g02976 596 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 591 - -
Cma04g02976 596 Pfam Nodulin-like 15 262 IPR010658 -
Cma04g02976 596 SUPERFAMILY MFS general substrate transporter 9 202 IPR036259 -
Cma04g02976 596 Gene3D MFS general substrate transporter like domains 313 522 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02976 Cma-Chr4:19524017 Cma14g01365 Cma-Chr14:10596292 1.25E-113 dispersed
Cma15g00074 Cma-Chr15:358409 Cma04g02976 Cma-Chr4:19524017 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma04g02976 - - csv:101211655 1020.38