Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma05g00002 ATGGATCTGGAAACTGGGGTTTATCCGAAGTATGCTAAGAAGGATTCATGGAAGACAGTTCTGACTCTAGCTTTTCAGAGTCTTGGGGTCGTCTATGGTGATTTAAGCACCTCACCTCTATACGTGTATAGGAACACTTTTGCTGAAGAAGACATTGAACACTCGAAGACCAACGAAGAGATTTACGGCGTTTTGTCATTCATTTTCTGGACCCTTACCATTGTCCCTTTGCTCAAATATGTATTTATTGTGCTCAAAGCAGACGATAATGGCGAGGGAGGGACTTTTGCTCTCTACTCATTGTTGTGTCGACACGCCCGAGTCGGCTGGTTGCCCAATGTTCAAGCGGCAGACGAGGAGCTGGCTGAGTACAAGAAAGAAACCATAATTTTGCCACCCAAAAAAAGCTTTGCATCTAAGCTGAAATCCACGTTAGAATCGCATAAGGTATTGCAGACACTTTTGCTCATTCTGGCTTTGATCGGGACGTGTATGGTAATTGGCGACGGCATCTTAACGCCTGCTATTTCTGTTTTTTCTGCTGTCTCTGGACTGGAGTTCACGATGTCAAAACAGCATCATAAATATGTGGAAGTTCCAGCTGCGTGCATCATACTGATAGGCTTGTTTGCCCTTCAACATTATGGAACGCACAGGGTTGGGTTCTTGTTTGCTCCTATAGTTACAACATGGCTTCTGTGCATTAGTGCAATTGGTTTATACAACATCATTCACTGGAATCCTCATGTTTATCAAGCACTTTCTCCTTATCATATGTTCCTATTCTTGAAGAAAACAAGGAGAGGAGGTTGGATGTCACTAGGAGGGATTCTACTTTGTATAACTGGTTCAGAAGCCATGTTTGCTGATCTTGGACACTTTTCACAATCATCCATCCAGATTGCATTTAGCTTTATGGTGTATCCATCTTTGGTTTTAGCTTATATGGGGCAGGCTGCGTATCTATCTCAACATCATTCGATACCAAATGATTATCGAATTGGATTCTATATATCTGTTCCAGAGAAGTTACGTTGGCCTGTTCTAGTAATTGCCATCCTTGCTGCTGTAGTAGGAAGCCAGGCCATCATCACTGGAACTTTCTCGATTATTAAGCAATGCTCTGCTTTGAATTGCTTCCCCAGAGTCAAAATAGTTCATACATCATCTAAAATTCATGGTCAAATTTATATCCCTGAGATTAATTGGATCCTGATGCTATTATGCTTAGCCGTTACAATTGGTTTCAGAGATACAAAACGTTTGGGTAATGCATCAGGCTTGGCAGTAATCACGGTGATGTTGGTGACGACCTGTTTAATGTCGTTGGTCATTGTGATTTGCTGGCACCAGAGTGTTGTCCTAGCAATTTTCTTTGTGGTCTTCTTTGGGTCAATTGAAGCCATGTATTTTTCAGCTTCTCTCATTAAGTTTCTAGAAGGAGCATGGGTTCCCATTGTGCTTGCCGTGGTCTTCATGATTATTATGTATGTGTGGCACTATGGAACGCTGAAGAAGTATGAATTTGATTTTCAAAATAAGGTCTCAATGAATTGGTTGCTTAGTGTGGGATCCAGTCTAGGTATTGTCCGAGTCCGCGGGATTGGCATTGTGCACACTGAACTTGTCTCAGGGCTTCCAGCAATGTTTTCACACTTCGTGACCAACCTTCCTGCGTTCCACCAGGTGGTGGTTTTTCTTTGCATCAAGTCTGTTCCAGTCCCACATGTTAAACCTGAAGAGCGGTTCCTAGTTGGTCGAATTGGAGCTCGTGAGTACAGGTTGTACAGGTGCGTTGTGCGATATGGATACAGAGATGTGCACAAGGATGACACCGAGTTTGAAAAAGATCTTGTATGTAGTATAGCTGAGTTTATAAGATCACAGAAGGTGGAATCCAGTGGTTGCAATGCTAATGCAGAGGATGATATTTGGAAGGAAAATGAGAGAATGACAGTAGTTGGAATGTGCTGTACGCATAGAGACGGAATTCAAATGCAAGAGGATGATGATGAAGAGTTAGGGGAGACGTCTGAGCATAGGGAAATAATGTCACCACGATGTCGGAATCGTATCGTCCGGGCACCCAGGAAAAGGGTGAGGTTTATTGTGCCGGAGAGTCCAAAAGTTGAGGCAACAGCAATGGAGGAACTGCAGGAGTTGATGGAAGCAAGGGAAGCAGGAGTTGCTTACATATTGGGTCAGGCGCATACTAAAGCAAAGCAGGGATCCAGCATGCTACGAAAGCTTATAATTAATTATGGGTATGAATTGTTAAGGAGGAATAGCAGGGGACCCAGTTACCCCCTCAATTTACCCCATGCGTCTACTCTTGAGGTAGGAATGTTGTACCATCTCTGA 2361 43.24 MDLETGVYPKYAKKDSWKTVLTLAFQSLGVVYGDLSTSPLYVYRNTFAEEDIEHSKTNEEIYGVLSFIFWTLTIVPLLKYVFIVLKADDNGEGGTFALYSLLCRHARVGWLPNVQAADEELAEYKKETIILPPKKSFASKLKSTLESHKVLQTLLLILALIGTCMVIGDGILTPAISVFSAVSGLEFTMSKQHHKYVEVPAACIILIGLFALQHYGTHRVGFLFAPIVTTWLLCISAIGLYNIIHWNPHVYQALSPYHMFLFLKKTRRGGWMSLGGILLCITGSEAMFADLGHFSQSSIQIAFSFMVYPSLVLAYMGQAAYLSQHHSIPNDYRIGFYISVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALNCFPRVKIVHTSSKIHGQIYIPEINWILMLLCLAVTIGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVICWHQSVVLAIFFVVFFGSIEAMYFSASLIKFLEGAWVPIVLAVVFMIIMYVWHYGTLKKYEFDFQNKVSMNWLLSVGSSLGIVRVRGIGIVHTELVSGLPAMFSHFVTNLPAFHQVVVFLCIKSVPVPHVKPEERFLVGRIGAREYRLYRCVVRYGYRDVHKDDTEFEKDLVCSIAEFIRSQKVESSGCNANAEDDIWKENERMTVVGMCCTHRDGIQMQEDDDEELGETSEHREIMSPRCRNRIVRAPRKRVRFIVPESPKVEATAMEELQELMEAREAGVAYILGQAHTKAKQGSSMLRKLIINYGYELLRRNSRGPSYPLNLPHASTLEVGMLYHL 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6807 11099 - CmaCh05G000020.1 Cma05g00002 294120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma05g00002 786 PANTHER POTASSIUM TRANSPORTER 6 1 785 - -
Cma05g00002 786 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 785 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma05g00002 786 Pfam K+ potassium transporter 24 606 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma05g00002 786 TIGRFAM kup: potassium uptake protein 23 785 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g01716 Cma05g00002 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00287 Cma-Chr4:1406073 Cma05g00002 Cma-Chr5:6807 0 dispersed
Cma04g01072 Cma-Chr4:5531269 Cma05g00002 Cma-Chr5:6807 0 dispersed
Cma05g00002 Cma-Chr5:6807 Cma14g00637 Cma-Chr14:3160662 0 dispersed
Cma04g01716 Cma-Chr4:8636950 Cma05g00002 Cma-Chr5:6807 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma05g00002 K03549 - tcc:18609411 1250.73