Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma05g00186 ATGGCTGCAACTTTAGTACTCATTTCCATCTTTCTTCCTCTTCTTCTGTTCTTTTTCTGGAAAATTCATAAGAACAACAGGATTCCAAACAACAAACTCCCTCCTGGATCAATGGGCTGGCCTCTAATTGGCGAGACCTTTCATTTCTACTCCCAAGATCTAACCTTTTTCTTTAGAAAACAAAAAAGGTACGGGGAGATATTCAAGACTCACATTCATGGGTGTCCCTGTGTGATGTTGACCACTCCTGAGGCAGCTCGCTTCGTGCTCGTCACACAGGCTCATCTCTTCAAACCCACATACCCACAAAGCAAAGAGCGTCTCATCGGACCATCGGCTTTGTTTTTCCACCAAAGTGAAACCCATTTGCGCCTTCGTAAGCTAATCCAAAGCTCCCTCTCACCGGACCCTGTTCGGACCTTGGTCCCTCACATCCACGCCCTCGCTATCTCTACATTGCCCTCGTGGCTCAATGGCCATCTCATCAATACTCTCCATCAAATGAAGAAGTTCTCTTTTGAAGTCGGAATTCTGGTAATTTTCGGGCATTTGGAGAACGCCAATTACAGAGACGAACTATTGAAGAACTATTCCATAGTGAACAAAGGCTACAATTCTTTCCCCACCAACTTTCCCGGAAGCATTTACAAAAAAGCACTTAAAGCAAGAAACAGACTGGGAGAGATCATAAACTGTATAATCTCAGAGAAAAGGGAGCAGAGAAAGGAATTAGAGGAGAAGAATCTGTTGGCGTGTCTCCTAAAATGGAGAGATGCAAAAGGAGAAAGCTTAAGCGACGACCAGATCGCCGACAACATCATCGGAGTCCTGTTTGCGGCTCAGGACACCACCGCCAGTGTTCTCACTTGGGTCGTTAAATATCTCCACGATAATGACAAAATTCTAGAAGCAGTCAAGGTGGAACAAAGGGCAATTGAAGAAGCCATTAATGAGGGGAGCCGAGCAATGAGCTGGGCAGACACACGAAACATGCCATTTACCAACAAGGTCGTGTTGGAGAGCTTGAGAATGGCGACTGTTATATCTTTCTCGTTTAGAGAAGCGGTGACCGACGGTTGGAAAGTAATGCCTTTGTTCAGGAATATTCATCACAATCCTGACTACTTTCTTCACCCTCACAAATTTGATCCCTCGAGATTTGAGGTTGCTCCAAGGCCCAATACATTCATTCCATTTGGCAGTGGGGTCCATGCCTGCCCTGGTAATGACCTTGCCAAGCTTGAAATCTTGATCATGATCCACCATTTAGTCACCAAATTCAGGTGGGAATTGGCAGGACAGAAAGATGGGATTGAGCATGGCCCATTTCCAGTTCCTAGGGATGGGCTTCCTATCATACTCTGGAGATTATCAAACTGA 1380 45.43 MAATLVLISIFLPLLLFFFWKIHKNNRIPNNKLPPGSMGWPLIGETFHFYSQDLTFFFRKQKRYGEIFKTHIHGCPCVMLTTPEAARFVLVTQAHLFKPTYPQSKERLIGPSALFFHQSETHLRLRKLIQSSLSPDPVRTLVPHIHALAISTLPSWLNGHLINTLHQMKKFSFEVGILVIFGHLENANYRDELLKNYSIVNKGYNSFPTNFPGSIYKKALKARNRLGEIINCIISEKREQRKELEEKNLLACLLKWRDAKGESLSDDQIADNIIGVLFAAQDTTASVLTWVVKYLHDNDKILEAVKVEQRAIEEAINEGSRAMSWADTRNMPFTNKVVLESLRMATVISFSFREAVTDGWKVMPLFRNIHHNPDYFLHPHKFDPSRFEVAPRPNTFIPFGSGVHACPGNDLAKLEILIMIHHLVTKFRWELAGQKDGIEHGPFPVPRDGLPIILWRLSN 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 803874 806436 + CmaCh05G001860.1 Cma05g00186 294304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma05g00186 459 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 9 455 - -
Cma05g00186 459 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00186 459 PRINTS E-class P450 group I signature 396 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00186 459 PRINTS E-class P450 group I signature 365 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00186 459 PRINTS E-class P450 group I signature 406 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00186 459 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00186 459 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00186 459 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 399 408 IPR017972 GO:0005506|GO:0016705
Cma05g00186 459 Gene3D Cytochrome P450 22 457 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00186 459 SUPERFAMILY Cytochrome P450 31 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00186 459 PANTHER CYTOCHROME P450 26 9 455 - -
Cma05g00186 459 Pfam Cytochrome P450 34 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00186 459 PRINTS P450 superfamily signature 406 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00186 459 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00186 459 PRINTS P450 superfamily signature 397 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00186 459 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00186 459 Coils Coil 298 318 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g01840 Cma05g00186 CCT
Cma01g01840 Cma05g00186 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00186 Cma-Chr5:803874 Cma16g00505 Cma-Chr16:2597830 2.66E-173 dispersed
Cma01g01840 Cma-Chr1:12161356 Cma05g00186 Cma-Chr5:803874 0 wgd
Cma11g01752 Cma-Chr11:11648636 Cma05g00186 Cma-Chr5:803874 0 wgd
Cma19g00605 Cma-Chr19:6623302 Cma05g00186 Cma-Chr5:803874 8.43E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma05g00186 K09843 - vvi:100245540 623.239