Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma05g00217 ATGTCGGTAACATCCATAACCCTCCCTTGTCCTCAACCCCACTTGCGATTCCCGTCGCAGAAAAAGCCTCTCAGATCTCGTTCTAACCTTGGGTTTCCTTCCCGACGCCTGATCTACGCTGCCGACGGGGTCTCCTCCTCCTCTTCTTCCTCGCCCCCATCCTCCGTTCAATTGCCGCAGCGGATTGCTCCGACTCCGGAACCGACGAAGCTTCCTTTGAGGAAGATTCCAGGTGACTATGGCCCGCCGGTGTTCGGAGCGTTGAAGGACCGACAAGACTATTTCTACAATCAGGGGAGAGAAGAGTATCTCAAATCTCGGATGCTTCGCTACGAATCCACTGTTTACAGAACCAATATGCCGCCGGGTCCATTTATCACCAACGATTCTCGAGTTGTGGTTTTACTCGACGGCAAGAGCTTCCCTGTTCTCTTCGACAATGCTAAAGTTGAGAAGAAAGATCTCTTCACCGGCACTTACATGCCTTACACAGAACTCACCGGTGGCTACAGAGTTCTCTCTTATATTGACCCATCTGAGCCCGATCACGAGAAGCTTAAACAGCTCATCTTCTTCCTCCTCAAGCACCGCCGTGATAAAATTCTCCCCGAATTTCACTCTACTTTTTCCGAGCTATTCCAGACTCTGGAGAAGGATTTGGCTGCCGTCGGCAGAGCAGAGTACAATGCTCCCGGTGAACAAGCGGCGTTTAATTTCTTGGCTCGGTCCCTCTTCGGCGCTAATCCTGTCGATACCAAATTGGGTCGAGACGCTCCGAAATTGATTGCGAAATGGATTCTGTTCCAGCTCGGCCCTGTTCTTAGACTCGGCCTCCCTAAGGTTGTCGAGGAGCTCCTCCTCCGCACGGTTCGGCTTCCACCGTCGCTGATTAAAGCCGATTACCGGCGGCTATACGACTTCTTTTACCAATCGTCGGAGGCGGTGTTTGAGGAGGCGGATAGATTGGGGATTTCGAGGGAAGAAGCTTGCCACAACTTGCTCTTCACCACGTGTTTCAATTCATTCGGAGGGATGAAGATTTTCTTCCCCAATATGATCAAATGGATCGGACGTGCCGGAGCGAATCTCCACACCCAATTAGCAAGGGAGATTCGTACCGCCGTGCAAGCCAACGGCGGGAGAATCACGATGGGGGCCATGGAACAGATGCCGCTGATGAAATCCGTAGTACACGAAGCGTTCAGAATCGAGCCGCCGGTTCCGGTTCAATACGGTCGGGCGAAGAAGGACCTAGTGGTCGAAAGCCACGACGCGGCTTTCGAGATCAAGGAAGGAGAAATGATTTGTGGGTTCCAACCATTCGCAACCAGAGACCCGAAAATCTTCGACAGAGCCGACGAGTTCGTGCCTGATCGGTTCACCGGCGACGGTGAGAGGTTGCTGAAGCACGTGCTATGGTCAAACGGACCGGAGACTCAATCGCCGACGGTTCAGAACAAGCAGTGCGCGGGAAAAGACTTCATCGTGTTCATCTCTCGCCTTCTCGTCGTCGAATTCTTCCTCCGGTACGACTCCTTCGACATCGAAGTCGCAAACTCTCCGTTGGGCGCCGCCATCACCGTAACTTCCCTGAAAAAAGCAAGTTTCCAAGAGGAAACAAAAAAATAA 1629 52.42 MSVTSITLPCPQPHLRFPSQKKPLRSRSNLGFPSRRLIYAADGVSSSSSSSPPSSVQLPQRIAPTPEPTKLPLRKIPGDYGPPVFGALKDRQDYFYNQGREEYLKSRMLRYESTVYRTNMPPGPFITNDSRVVVLLDGKSFPVLFDNAKVEKKDLFTGTYMPYTELTGGYRVLSYIDPSEPDHEKLKQLIFFLLKHRRDKILPEFHSTFSELFQTLEKDLAAVGRAEYNAPGEQAAFNFLARSLFGANPVDTKLGRDAPKLIAKWILFQLGPVLRLGLPKVVEELLLRTVRLPPSLIKADYRRLYDFFYQSSEAVFEEADRLGISREEACHNLLFTTCFNSFGGMKIFFPNMIKWIGRAGANLHTQLAREIRTAVQANGGRITMGAMEQMPLMKSVVHEAFRIEPPVPVQYGRAKKDLVVESHDAAFEIKEGEMICGFQPFATRDPKIFDRADEFVPDRFTGDGERLLKHVLWSNGPETQSPTVQNKQCAGKDFIVFISRLLVVEFFLRYDSFDIEVANSPLGAAITVTSLKKASFQEETKK 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 915909 917537 - CmaCh05G002170.1 Cma05g00217 294335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma05g00217 542 PANTHER ALLENE OXIDE SYNTHASE, CHLOROPLASTIC 57 533 - -
Cma05g00217 542 Pfam Cytochrome P450 365 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00217 542 MobiDBLite consensus disorder prediction 43 62 - -
Cma05g00217 542 Gene3D Cytochrome P450 67 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00217 542 PANTHER CYTOCHROME P450 26 57 533 - -
Cma05g00217 542 MobiDBLite consensus disorder prediction 43 76 - -
Cma05g00217 542 SUPERFAMILY Cytochrome P450 72 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00217 542 MobiDBLite consensus disorder prediction 1 29 - -
Cma05g00217 542 PRINTS E-class P450 group IV signature 390 406 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00217 542 PRINTS E-class P450 group IV signature 443 461 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00217 542 PRINTS E-class P450 group IV signature 489 507 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma05g00217 Cma12g00501 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00217 Cma-Chr5:915909 Cma11g01781 Cma-Chr11:11918812 2.95E-178 dispersed
Cma12g00501 Cma-Chr12:2599868 Cma05g00217 Cma-Chr5:915909 0 wgd
Cma19g00641 Cma-Chr19:6819021 Cma05g00217 Cma-Chr5:915909 1.41E-180 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma05g00217 K01723 - csv:101221732 953.355