Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma05g00347 ATGGCTGGTTCTTCAAGAGCTCTGTTTCTTCTCACATTCCTCCTCCTCAGCTTCTCAGAAGCTACAGAGATTCTGGTCGGAGGCAAAGCCAATGCCTGGAAACTCCCATCTTCCCAATCTCAGTCGCTCAATCAATGGGCGGAAACCTCCCGCTTTCGCGTCGGCGACACACTCGTGTGGAGCTACGAAGAAGGAAAAGATTCGGTACTGAAAGTGGGAAAGGAAGATTACGAAGCCTGCAACACCCAAAACCCAGAACAGAGGTTCGAGGATGGGAACACCAAGGTCCAGCTACACAAACCAGGCCCATTCTACTTCATCAGTGGCGCAAAGGGTCACTGCGAACAGGGTCAGAAGCTGGTCGTCGTCGTTGTGACTCCTCGCCGGAGATTCGTCAGCTTCTCTCCCGCGCCTTCTCCGGCTGAGATTGAGGGTCCCGCGGTTTCTCCGTCGAGTGGTGCGGCGAGTTTTAATGTTGGGTTTTTAGCGGCGGTTGTCGGAATCTTGGGTCTTGGAGTTGGTTTCCTCTGA 531 53.67 MAGSSRALFLLTFLLLSFSEATEILVGGKANAWKLPSSQSQSLNQWAETSRFRVGDTLVWSYEEGKDSVLKVGKEDYEACNTQNPEQRFEDGNTKVQLHKPGPFYFISGAKGHCEQGQKLVVVVVTPRRRFVSFSPAPSPAEIEGPAVSPSSGAASFNVGFLAAVVGILGLGVGFL 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1531886 1534103 - CmaCh05G003470.1 Cma05g00347 294465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma05g00347 176 PANTHER EARLY NODULIN-LIKE PROTEIN 3 9 172 - -
Cma05g00347 176 ProSiteProfiles Phytocyanin domain profile. 22 126 IPR003245 GO:0009055
Cma05g00347 176 CDD OsENODL1_like 22 120 IPR041846 -
Cma05g00347 176 PANTHER BLUE COPPER PROTEIN 9 172 IPR039391 GO:0009055
Cma05g00347 176 SUPERFAMILY Cupredoxins 21 125 IPR008972 -
Cma05g00347 176 Gene3D - 20 128 IPR008972 -
Cma05g00347 176 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma05g00347 Cma12g00366 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00347 Cma-Chr5:1531886 Cma16g00852 Cma-Chr16:5048663 2.36E-36 dispersed
Cma12g00366 Cma-Chr12:1874711 Cma05g00347 Cma-Chr5:1531886 9.18E-83 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma05g00347 - - csv:101210664 250.366