Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma05g00451 | ATGCCGAGCATTTCGGCCCTCTATTCCATTGAAGAAATCTCACGGCACAGTTCCAACGACGACTGTTGGATCATTATCGATGGCAAGGTATACGATTTGACGTCATATTTGGATGAGCATCCTGGTGGAGATGATGTTATTATAGCTGCAACTGGCAGAGATGCCACAGATGATTTTGAAGATGCTGGTCATAGCAAAGATACTCGAGAGCTGATGAAGAAGTTCTATATCGGCGAGCTTGATCCTTCTTCCTCAGCGATCCCAGCACTCGAAACAAAAGAACCAGATGGTTATGCAGCTCAGGTTCAGACCTTGACAAAGCAATACTGGGGGATTCCTATTGCAGTACTTGGTATTTCTGTAGTACTTGGCTGGTTATACTTGCTGAAAAAGTGA | 396 | 44.44 | MPSISALYSIEEISRHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIIAATGRDATDDFEDAGHSKDTRELMKKFYIGELDPSSSAIPALETKEPDGYAAQVQTLTKQYWGIPIAVLGISVVLGWLYLLKK | 131 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2070589 | 2072796 | + | CmaCh05G004510.1 | Cma05g00451 | 294569 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma05g00451 | 131 | Gene3D | - | 5 | 89 | IPR036400 | - | |
Cma05g00451 | 131 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - | |
Cma05g00451 | 131 | PANTHER | CYTOCHROME B5 | 3 | 129 | - | - | |
Cma05g00451 | 131 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - | |
Cma05g00451 | 131 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 10 | 80 | IPR001199 | - | |
Cma05g00451 | 131 | PANTHER | CYTOCHROME B5 ISOFORM A | 3 | 129 | - | - | |
Cma05g00451 | 131 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037 | |
Cma05g00451 | 131 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
Cma05g00451 | 131 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
Cma05g00451 | 131 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
Cma05g00451 | 131 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
Cma05g00451 | 131 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 5 | 85 | IPR036400 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma05g00451 | Cma-Chr5:2070589 | Cma14g01890 | Cma-Chr14:13376466 | 3.27E-37 | dispersed | |
Cma05g00451 | Cma-Chr5:2070589 | Cma06g01244 | Cma-Chr6:8291203 | 1.32E-37 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma05g00451 | K23490 | - | csv:101220127 | 223.016 |