Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma05g00451 ATGCCGAGCATTTCGGCCCTCTATTCCATTGAAGAAATCTCACGGCACAGTTCCAACGACGACTGTTGGATCATTATCGATGGCAAGGTATACGATTTGACGTCATATTTGGATGAGCATCCTGGTGGAGATGATGTTATTATAGCTGCAACTGGCAGAGATGCCACAGATGATTTTGAAGATGCTGGTCATAGCAAAGATACTCGAGAGCTGATGAAGAAGTTCTATATCGGCGAGCTTGATCCTTCTTCCTCAGCGATCCCAGCACTCGAAACAAAAGAACCAGATGGTTATGCAGCTCAGGTTCAGACCTTGACAAAGCAATACTGGGGGATTCCTATTGCAGTACTTGGTATTTCTGTAGTACTTGGCTGGTTATACTTGCTGAAAAAGTGA 396 44.44 MPSISALYSIEEISRHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIIAATGRDATDDFEDAGHSKDTRELMKKFYIGELDPSSSAIPALETKEPDGYAAQVQTLTKQYWGIPIAVLGISVVLGWLYLLKK 131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2070589 2072796 + CmaCh05G004510.1 Cma05g00451 294569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma05g00451 131 Gene3D - 5 89 IPR036400 -
Cma05g00451 131 SMART Cyt_b5_2 8 81 IPR001199 -
Cma05g00451 131 PANTHER CYTOCHROME B5 3 129 - -
Cma05g00451 131 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cma05g00451 131 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 80 IPR001199 -
Cma05g00451 131 PANTHER CYTOCHROME B5 ISOFORM A 3 129 - -
Cma05g00451 131 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Cma05g00451 131 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cma05g00451 131 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cma05g00451 131 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cma05g00451 131 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cma05g00451 131 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 85 IPR036400 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00451 Cma-Chr5:2070589 Cma14g01890 Cma-Chr14:13376466 3.27E-37 dispersed
Cma05g00451 Cma-Chr5:2070589 Cma06g01244 Cma-Chr6:8291203 1.32E-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma05g00451 K23490 - csv:101220127 223.016