Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma05g00453 ATGTCATCACAAGCCCTCAACGACCTTCTTCTCCACTTCCCCATTTCCATTACCCAAAGCTTCGAAGCTCTTCTTCTTAGCCTTATACTCGTCTCCATTTTCGCCTTCCTCCTCCACCCCGGCGGCCTTGCCTGGGCCATTTCCAAGTCCAAAACCACCGCCTCCGCCGCCATTCCCGGCCCTTCCGGCCTCCCATTCATCGGATTACTCCATGTCTTCACTAATTCAACCCCTCACAGAGCTCTTTCCGACCTTGCCAATCGATTCAAAGCATACCCTTTAATGGCCTTCTCCGTTGGCCTTACAAGATTCGTCATTTCAAGCAATCCTGATTTTGCCAAAGAGATTTTAAACAGCCCTTCCTTTGCCGATAGACCTGTAAAGGAGTCCGCTTATGAGCTGCTCTTCCACAGAGCAATGGGTTTTGCTCCTTATGGTGAGTATTGGAGGAATTTGAGGAGAATTTCAGCTACTTACATGTTTAGTCCCAAGAGAATTGCTGGTTTTGAAGGGTTTAGGAGGGAAATTGGAGCTAAAATGATGAGGGAAATTGAGAAATCCATGGCTTTAAAAGGGGAAGTGAGAATTAAAGAGATTCTTCATTTTGGGTCTTTGAATAATGTAATGATGACTGTTTTTGGTAAGTGTTATGAGTTTAATGGTGAAGGAAATGGGGCAGAGCTTGAGGAATTAGTAAGGGAAGGGTATGATCTTCTTGGGATTTTCAATTGGAGTGACCATTTCCCCTTCTTGGGGTTCTTGGATTTACAAGGCGTGAGGAAAAGGTGTAGAGTCTTGGCTTCTAAGGTCAATATATTTGTCGGAAAAATCATTGAAGAACATAGAACAAAGAGGAAAGAACAACAACAAAACAGAGATTTTGTCGATGTTCTGCTTGATTTGGAGAATGATGACAAGCTATCAGATTCCGACATGATTGCTGTTCTCTGGGAAATGATCTTTAGAGGGACCGACACTGTGGCGATACTTCTGGAGTGGATTTTAGCTCGAATGGTAAAACACCCAGAAATCCAAATGAAAGCCCAAGACGAAATCGATTCATTAATGGGCAAAAGCTCTCGACCCATTACAGATTCCGACATCCAAAACCTTCCATATCTGCAAGCTATTGTTAAAGAATGTCTTAGAATGCACCCACCAGGGCCACTTCTGTCATGGGCACGACTAGCGACCGCCGACGTTCACGTCGGCGGTCGTGTGATTCCGGCGGGGACGACGGCGATGGTGAACATGTGGGCGATAACCCACAACGAGAGGGTTTGGTTAGAGCCAGAGAAATTCGAGCCAAATCGGTTCATGGAAGAGGAAGTTAGTGTAATGGGGAGTGATTTGAGGTTGGCTCCATTTGGGGCAGGGCGAAGGGTATGTCCGGGAAAAGCCATGGGTTTAGCCACCGTGCAGCTCTGGTTGGCTCAGCTGCTTCGAGCTTACAAATGGGTGGCGTGTTCTGAAGAAGCCGCCATTAATGGCGGCGTCGATTTGTCAGAGTGCCTTAAACTCTCTCTGGAAATGGAAGCTCCTCTGGTTTGTAGAGCTATTGGGAGGAGGGTGGGTTTGGCAGAGGAATGA 1590 46.67 MSSQALNDLLLHFPISITQSFEALLLSLILVSIFAFLLHPGGLAWAISKSKTTASAAIPGPSGLPFIGLLHVFTNSTPHRALSDLANRFKAYPLMAFSVGLTRFVISSNPDFAKEILNSPSFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATYMFSPKRIAGFEGFRREIGAKMMREIEKSMALKGEVRIKEILHFGSLNNVMMTVFGKCYEFNGEGNGAELEELVREGYDLLGIFNWSDHFPFLGFLDLQGVRKRCRVLASKVNIFVGKIIEEHRTKRKEQQQNRDFVDVLLDLENDDKLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVKHPEIQMKAQDEIDSLMGKSSRPITDSDIQNLPYLQAIVKECLRMHPPGPLLSWARLATADVHVGGRVIPAGTTAMVNMWAITHNERVWLEPEKFEPNRFMEEEVSVMGSDLRLAPFGAGRRVCPGKAMGLATVQLWLAQLLRAYKWVACSEEAAINGGVDLSECLKLSLEMEAPLVCRAIGRRVGLAEE 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2082462 2084645 - CmaCh05G004530.1 Cma05g00453 294571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma05g00453 529 Gene3D Cytochrome P450 45 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00453 529 PANTHER CYTOCHROME P450 78A5 10 521 - -
Cma05g00453 529 PANTHER CYTOCHROME P450 78A7-RELATED 10 521 - -
Cma05g00453 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Cma05g00453 529 SUPERFAMILY Cytochrome P450 58 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00453 529 Pfam Cytochrome P450 59 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00453 529 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00453 529 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00453 529 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00453 529 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00453 529 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00453 529 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00453 529 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00453 529 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00453 529 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00453 529 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00453 529 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00453 Cma-Chr5:2082462 Cma17g00500 Cma-Chr17:3196541 7.51E-180 dispersed
Cma13g01064 Cma-Chr13:8065753 Cma05g00453 Cma-Chr5:2082462 0 transposed
Cma18g00699 Cma-Chr18:6378834 Cma05g00453 Cma-Chr5:2082462 0 transposed
Cma20g01100 Cma-Chr20:8558485 Cma05g00453 Cma-Chr5:2082462 5.21E-170 transposed
Cma12g00105 Cma-Chr12:425207 Cma05g00453 Cma-Chr5:2082462 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma05g00453 K20619 - csv:101221468 868.226