Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma05g00666 ATGTATAAAATTATGGTCGAACTCCATTTCATCAACTCCACCGGTATCACCACCTACTCCATATATTACTTGGCACCAAAAGCGTTGCTCACAAAAACTAAAGCAAATTTCAAAAACCCCATCAAACCAAATTCTCTCATCCTCCTAATTTTCTCGCCATCCAAACACCCAAAACAGATGGATTCTCAACTTACCAACGCCCAGGATTTCATCTTCCGATCAAAGCTCCCCGACATCTACATCCCAAACCACCTCCCCCTCCACACCTACTGCTTCGAACACCTCTCCCAATTCCACCACCGCCCCTGCCTAATCAACGCCGCCACCGGGCAAATCCACACCTACGCCGCCGTCGACCTAGCCTCCAGACGCGTCGCCACTGGTCTAAGCAAGATCGGCGTCGGACAAGGCGATGTCATAATGCTTCTACTACAGAACAGCCCTGAATTCGTCTTCGCCTTCCTTGGCGCGTCCTATGCCGGCGCCATTAGCACCACCGCAAACCCATTATACAAGCCGGCGGAGATCAAGAAACAGGCGGCCACGGCGAGGCCGAAGGTTATAATTACGCAGGCGGAATTTGTGGAGAAAGTTCGGGAATTTGCAATGGAAAATGGGGTGAAAATTATATGTACGGATTCCCCTCCGGTGGGTTGCCTGAGATTCTCCGAGATTTTAGAGGCCGATGAAAATGAAATTCCGGCCGTGAAAATTAACTCCAACGACGTTGTTGCTCTTCCCTTCTCGTCTGGAACCACCGGAGTTCCTAAAGGCGTTATGCTCACACACAAATCTCTCGTTACAAGCATCGCTCAACAGGTGGATGGAGAGAATCCAAATGTGGACTTAAACAGCAACGACGTGCTCATATGTCTTCTCCCATTATTCCATATCTACTCTCTCAATTCCGTTCTCCTCTGCGGACTACGTGTCGGCGCCGCCATTCTCATCCTCCAAAAATACGACATGTCGACTCTTCTCCGCCTCATTCAGACCCACAAAGCCACTATAGCCCCCTTCGTCCCTCCGATCGTCTTGGACTTCGCCAAAAACCCCGACATCCACCGTTACGACTTGTCGTCCATCAGAATCGTCATGTCGGGTGCTGCCCCCATGGGCAAGGCCCTGGAAGACACTGTCAAGGCCAGACTCCCCAACGCCACGCTTGGACAGGGATATGGGATGACGGAGGCCGGTCCGGTTCTGTCGATGTGTCTGGGTTTTGCAAAGGAGCCGTTCGAGTTTAAATCAGGTGCGTGCGGGACCGTCGTAAGGAACGCTGAGATGAAGATCATACACCCTGAAACTGGTGTATCTTTGCCACGTAATCACCCTGGTTACCTTAATAACAAAGAAGCCACAGAGAAGACCATAGACAAGAATGGGTGGCTCCACACTGGAGACTTAGGGTTCATCGACGACGACGACGAGATCTTCATCGTCGATCGACTCAAGGAACTGATCAAATACAAAGGATATCAAGTGGCCCCAGCTGAGCTTGAAGCTCTCTTGACTTCAAACCCTAATGTTTCTTCTGCTGCTGTGGTGCCAATGGAAGATGAAGCAGCTGGAGAGATCCCGGCTGCATTTGTTGTTAGATCTAAAGGCTCCAAGATTAGTGAGGATGATATCAAGAAGTATATTTCTGATCAGGTTATATATTACAAGAAAATCAGGAAGGTTTTCTTTGTGGACTCAATTCCAGTTGCTCCTTCAGGCAAGATCTTGAGGAAAGTGTTAAAAGCCCAATTGGAGAATGGTGCCTTTTAA 1770 49.27 MYKIMVELHFINSTGITTYSIYYLAPKALLTKTKANFKNPIKPNSLILLIFSPSKHPKQMDSQLTNAQDFIFRSKLPDIYIPNHLPLHTYCFEHLSQFHHRPCLINAATGQIHTYAAVDLASRRVATGLSKIGVGQGDVIMLLLQNSPEFVFAFLGASYAGAISTTANPLYKPAEIKKQAATARPKVIITQAEFVEKVREFAMENGVKIICTDSPPVGCLRFSEILEADENEIPAVKINSNDVVALPFSSGTTGVPKGVMLTHKSLVTSIAQQVDGENPNVDLNSNDVLICLLPLFHIYSLNSVLLCGLRVGAAILILQKYDMSTLLRLIQTHKATIAPFVPPIVLDFAKNPDIHRYDLSSIRIVMSGAAPMGKALEDTVKARLPNATLGQGYGMTEAGPVLSMCLGFAKEPFEFKSGACGTVVRNAEMKIIHPETGVSLPRNHPGYLNNKEATEKTIDKNGWLHTGDLGFIDDDDEIFIVDRLKELIKYKGYQVAPAELEALLTSNPNVSSAAVVPMEDEAAGEIPAAFVVRSKGSKISEDDIKKYISDQVIYYKKIRKVFFVDSIPVAPSGKILRKVLKAQLENGAF 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3423758 3428696 + CmaCh05G006660.1 Cma05g00666 294784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma05g00666 589 Pfam AMP-binding enzyme C-terminal domain 499 574 IPR025110 -
Cma05g00666 589 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 63 585 - -
Cma05g00666 589 Gene3D - 62 484 IPR042099 -
Cma05g00666 589 CDD 4CL 81 580 - -
Cma05g00666 589 Gene3D - 485 587 IPR045851 -
Cma05g00666 589 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 63 585 - -
Cma05g00666 589 SUPERFAMILY Acetyl-CoA synthetase-like 67 586 - -
Cma05g00666 589 ProSitePatterns Putative AMP-binding domain signature. 246 257 IPR020845 -
Cma05g00666 589 Pfam AMP-binding enzyme 94 490 IPR000873 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma05g00666 Cma10g00401 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00666 Cma-Chr5:3423758 Cma14g01039 Cma-Chr14:5470037 0 dispersed
Cma02g00473 Cma-Chr2:2484147 Cma05g00666 Cma-Chr5:3423758 6.34E-50 transposed
Cma10g00401 Cma-Chr10:1859499 Cma05g00666 Cma-Chr5:3423758 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma05g00666 K01904 - csv:101210868 900.968