Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma05g00694 ATGGGTTGTTTTCCGGTGGTGGAGCTCACTTGGGAATTTTTAGTCAACGTGCCTGAGAAAATTCCTATTGAAGAAGTGTTTGAGCAGCTGAAATGTACAAGAGAAGGTTTAACTTCCCAAGAAGGGGAGAATCGTCTTCAAATCTTTGGACCCAACAAGCTAGAAGAGAAAAAGGAAAGCAAGATTCTGAAGTTTCTTGGGTTTATGTGGAATCCCCTGTCTTGGGTCATGGAAGCTGCAGCTATCATGGCCATTGCCTTGGCCAACGGCGGCGGTAAGGGCCCCGATTGGCAGGACTTCGTCGGTATCGTCTGTTTGTTGGTTATCAACTCCACCATTAGTTTCATTGAAGAGAACAATGCTGGTAATGCTGCAGCTGCTCTCATGGCTGGTCTTGCACCTAAAACTAAGGTTCTAAGGGATGGAAAATGGTGTGAACAAGATGCATCAATTCTGGTTCCAGGAGACGTGATTAGTGTGAAACTAGGAGACATCATCCCGGCTGATGCTCGTCTTCTCGAGGGTGATCCGTTAAAGGTCGATCAATCTGCGTTGACTGGAGAATCACTTCCCGTGACGAAGAATCCAGGGGACGAAGTTTTCTCTGGCTCAACTTGCAAACAAGGAGAAATTGAAGCTGTTGTTATTGCCACTGGTGTCCACACCTTCTTTGGAAAGGCAGCTCATCTTGTTGATAGCACCAACCAAGTTGGACACTTCCAAAAGGTTCTTACTGCCATTGGGAACTTCTGTATTTGCTCCATTGCCATTGGTATGCTGATTGAGATCATCGTCATGTACCCGATCCAACGCCGTGCCTACCGAGATGGAATTGACAACCTTTTGGTTCTTTTGATTGGAGGCATTCCAATTGCTATGCCTACTGTCTTGTCTGTCACTATGGCTATTGGGTCTCACAAGCTGTCCCAACAGGGTGCTATCACTAAGAGAATGACTGCTATCGAAGAAATGGCCGGTATGGACGTCCTCTGCAGCGACAAAACCGGAACGCTCACTCTTAACAAGTTGAGTGTCGACAAGAACTTGATTGAGGTATTCGTTAAGGGCATCGACAAGGAACATGTCGTTCTTCTTGCTGCAAGAGCTTCTAGGACTGAAAACCAGGATGCGATCGATGCTGCCATGGTCGGAATGCTCGCTGACCCGAAAGAGGCAAGAGCTGGAATTAGAGAAATTCACTTCTTCCCATTCAACCCTGTTGATAAGAGAACTGCTTTGACTTACATTGATTCTAATGGAAACTGGCACCGTGCTAGCAAAGGCGCTCCCGAGCAGATCTTGACACTTTGCAACTGCAAAGAGGACTTCAAGAGGAAGGTGTTTTCTGTGATTGACAAGTTCGCTGAGCGCGGGCTTCGATCTTTGGCTGTTGCTAGACAGGAAGTGCCTGAGAAAAACAAGGAGAGTCCCGGTGCTCCGTGGCAATTCGTTGGTCTGTTGCCTCTTTTCGACCCTCCTCGGCACGACAGTGCAGAAACCATCCGACGAGCTCTCAACTTGGGTGTGAATGTCAAGATGATTACTGGTGATCAACTTGCTATTGCTAAGGAAACTGGCCGACGACTTGGAATGGGAACGAATATGTATCCATCTTCTTCGTTACTCGGCCAACACAAGGACGAAAGCATCGCTGGCCTCCCGGTTGAAGAGTTGATCGAGAAAGCTGATGGATTTGCTGGAGTGTTTCCAGAGCACAAATACGAAATCGTGAAGAAGTTGCAAGAGAGAAAGCACATTTGTGGAATGACAGGAGATGGTGTGAATGATGCTCCTGCTTTAAAGAAGGCAGACATTGGTATAGCTGTTGCGGATGCTACCGATGCAGCACGAGGCGCTTCCGACATTGTTCTTACCGAGCCTGGATTGAGCGTAATCATCAGTGCCGTGTTGACCAGCAGAGCAATCTTTCAGAGGATGAAGAACTATACCATTTATGCAGTTTCAATCACTATTCGTATTGTGTTTGGTTTTATGTTGATTGCTCTCATTTGGAAGTTTGATTTTTCACCATTCATGGTTTTGATTATTGCTATATTGAATGATGGTACCATTATGACAATTTCAAAGGACAGGGTGAAGCCATCACCATTACCTGACAGTTGGAAACTGAAAGAGATTTTTGCGACCGGGGTAGTACTCGGAGGGTACTTAGCGTTGATGACAGTTATATTCTTTTGGTTAATGGACGGAACGAACTTCTTTTCGAATACGTTCGGTGTAAAATCGATCCGTCATAGTGAATATGAAATGATGGCTGCTTTGTACCTGCAAGTGAGTATTGTGAGCCAGGCTTTGATTTTTGTGACTCGATCGCGGAGCTGGTCGTACATCGAGAGACCTGGACTTCTATTAGTCGGCGCATTCTTCATTGCACAGCTGGTTGCAACGGTGATCGCCGTGTATGCGGACTGGCGTTTCGCAAAGATGAAGGGAATCGGATGGGGATGGGCCGGTGTCATCTGGTTGTACAGCATCATTTTCTATATTCCGCTCGATCTCATGAAGTTTGCTATTCGATATATATTGAGCGGAAAGGCATGGCTCAACTTGTTAGAAAACAAGACCGCTTTCACCACCAAGAAAGACTATGGAAAAGAGGAACGAGAAGCTCAATGGGCCCTTGCTCAAAGGACATTACACGGACTTCAACCTCCCGAGTCGACAAACATCTTCTCCGAAAAAAGTAGCTACAGAGAACTCTCGGAGATCGCAGAGCAAGCTAAGAGACCTGAACACGCTCAAGGGTCATGTCGAGTCGGTCGTGAAGTTGAAGGGACTCGACATCGACACGATCCAGCAACACTACACAGTGTGAAAAGTATTGGTTCCTCCAATGAAGAAATGAATTCGATTCACTTTGCTGTGCCAAGGAAAGAAAGAGGCAATGTTTGA 2913 46.31 MGCFPVVELTWEFLVNVPEKIPIEEVFEQLKCTREGLTSQEGENRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKGPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWCEQDASILVPGDVISVKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMLIEIIVMYPIQRRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGIDKEHVVLLAARASRTENQDAIDAAMVGMLADPKEARAGIREIHFFPFNPVDKRTALTYIDSNGNWHRASKGAPEQILTLCNCKEDFKRKVFSVIDKFAERGLRSLAVARQEVPEKNKESPGAPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQHKDESIAGLPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWLMDGTNFFSNTFGVKSIRHSEYEMMAALYLQVSIVSQALIFVTRSRSWSYIERPGLLLVGAFFIAQLVATVIAVYADWRFAKMKGIGWGWAGVIWLYSIIFYIPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPESTNIFSEKSSYRELSEIAEQAKRPEHAQGSCRVGREVEGTRHRHDPATLHSVKSIGSSNEEMNSIHFAVPRKERGNV 970
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3657703 3662189 + CmaCh05G006940.1 Cma05g00694 294812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma05g00694 970 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Cma05g00694 970 Pfam haloacid dehalogenase-like hydrolase 327 604 - -
Cma05g00694 970 SFLD C1.7: P-type atpase like 313 641 - -
Cma05g00694 970 SUPERFAMILY Calcium ATPase, transduction domain A 134 231 IPR008250 -
Cma05g00694 970 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 565 678 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cma05g00694 970 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 103 538 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cma05g00694 970 PRINTS H+-transporting ATPase (proton pump) signature 590 606 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cma05g00694 970 PRINTS H+-transporting ATPase (proton pump) signature 762 783 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cma05g00694 970 PRINTS H+-transporting ATPase (proton pump) signature 621 646 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cma05g00694 970 PRINTS H+-transporting ATPase (proton pump) signature 562 578 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cma05g00694 970 PRINTS H+-transporting ATPase (proton pump) signature 447 465 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cma05g00694 970 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Cma05g00694 970 ProSitePatterns E1-E2 ATPases phosphorylation site. 333 339 IPR018303 -
Cma05g00694 970 Gene3D - 343 490 IPR023299 GO:0000166
Cma05g00694 970 SFLD p-type atpase 313 641 IPR044492 -
Cma05g00694 970 MobiDBLite consensus disorder prediction 911 937 - -
Cma05g00694 970 PRINTS P-type cation-transporting ATPase superfamily signature 181 195 - -
Cma05g00694 970 PRINTS P-type cation-transporting ATPase superfamily signature 590 609 - -
Cma05g00694 970 PRINTS P-type cation-transporting ATPase superfamily signature 613 625 - -
Cma05g00694 970 PRINTS P-type cation-transporting ATPase superfamily signature 331 345 - -
Cma05g00694 970 PRINTS P-type cation-transporting ATPase superfamily signature 485 496 - -
Cma05g00694 970 PRINTS P-type cation-transporting ATPase superfamily signature 507 517 - -
Cma05g00694 970 PANTHER PLASMA MEMBRANE ATPASE 19 923 - -
Cma05g00694 970 Pfam E1-E2 ATPase 133 310 - -
Cma05g00694 970 Gene3D - 96 817 - -
Cma05g00694 970 CDD P-type_ATPase_H 36 843 IPR006534 GO:0008553|GO:0016021|GO:0120029
Cma05g00694 970 SUPERFAMILY Calcium ATPase, transmembrane domain M 19 849 IPR023298 -
Cma05g00694 970 SUPERFAMILY HAD-like 327 637 IPR036412 -
Cma05g00694 970 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 36 808 IPR006534 GO:0008553|GO:0016021|GO:0120029
Cma05g00694 970 PANTHER CALCIUM-TRANSPORTING ATPASE 19 923 - -
Cma05g00694 970 Gene3D - 328 627 IPR023214 -
Cma05g00694 970 Gene3D - 134 218 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00694 Cma-Chr5:3657703 Cma12g00291 Cma-Chr12:1492694 0 dispersed
Cma12g00891 Cma-Chr12:6799023 Cma05g00694 Cma-Chr5:3657703 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma05g00694 K01535 - csv:101221564 1689.47