Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma05g00712 TCACCGGCTCATGATCTGCCTCAAATCAGACTCTTCTTGTTTCGACGGTTGATTTTGAAGATCTGGTGGATTTCTGAAGTTACCTTCTTGACACTGGAGACAATGGTGGTGAATTTCCAGTGCACTGTTCTTGTGTTTCTGGTGCTTCTTGTTGTTGGGAAGGCAGAAATTTACATTGTCACCATTGAAGGAGAACCTATTGTGAGTTACAAAGGTGATCTCGATGGGTTTGAAGCCACAGCAATGGAATCTAATGAAAAGATCGACCCTACCAGTGAAATTGTGACATCCTATGCTCGTCACCTCGAAAGTAAACACGACATGCTTCTCGGGATGTTGTTTGAGAGAGGATCCTTCAAGAAGCTCTATAGTTACAAGCATCTCATCAATGGATTTGCTGTTGACATCACGCCTGAACAGGCAGAGACTCTAAGACATACACCAATTGTAAAATCTGTTGAGATGGACTGGAAGGTTAGAAAACTAACAACACACACGCCAGAGTTTTTGGGCCTTCCAACTGGCGTATGGCCAACCGGCGGTGGCTTTGACAGGGCTGGAGAGGACATTGTGATTGGATTTGTGGACTCCGGGATTTATCCACATCATCCAAGTTTTGCTACATATAATACCGAACCTTTTGGGCCGTGTTTGAAGTATAAAGGGAAATGTGAAGTAGACCCTGACACTAAGAAGGAATTTTGTAATGGAAAAATTGTTGGAGCCCAACATTTTGCAGAAGCTGCTAAAGCAGCTGGGGCATTTAATCCAGCAATTCATTTTGAATCTCCTTTGGATGGTGACGGACATGGAAGCCATACAGCAGCAATTGCTGCTGGAAATAATGGAATCCCTGTGAGAATGCATGGCTATGAATTTGGTAAAGCAAGTGGGATGGCACCCCGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGGATTTTTGGGGGATTTGTTGCTGATGTAGTTGCAGCTATTGATCAGGCTGTACATGATGGGGTCGATATTCTCAGTCTTTCGGTGGGGCCAAATAGTCCTCCTGCAACTACCAAGATCACATATTTAAACCCTTTCGATGCGACCCTTCTTTCAGCTGTGAAGGCTGGTGTATTTGTCGCACAGGCTGCTGGAAATGGAGGTCCATTTCCTAAAACTTTGGTGTCGTATAGTCCATGGATAGCAACTGTGGCAGCTGCAATTGACGACAGAAGATACAAGAACCATCTGACACTTGGTAATGGAAAAATTTTGGCTGGGCTTGGTTTATCACCTGCTACACATTTAAATCGGACATACACATTGGTCGCAGCTAATGACGTTCTGTTAGATTCTTCAGTATCGAAGTACAGCCCTTCAGACTGCCAAAGGCCTGATGTTCTAAACAAACGTTTGGTTGAAGGAAAAGTTCTTCTTTGTGGATATTCGTTCAGTTTTGTTGTTGGTACCGCTTCAATCAAGAAGGTTTCTCAAACAGCAAGAGCCCTTGGGGCAGCTGGCTTTGTTCTTGCTGTTGAAAACATCTCTCCTGGATCTAAATTTGACCCTGTTCCTGTTGGCATTCCTGGGATTCTTATAACTGATGTCAGCAAGTCGATGGATCTTATAGACTACTACAACACCTCTACGCCCAGAGACTGGACCGGTCGGGTCAAGAGCTTTGATGCTGTGGGTAGCATTGGGGATGGTTTGATGCCTTTATTATACAAATCAGCTCCTGAGGTAGCATTGTTTTCTGCTCGTGGGCCCAATATTAGAGATTTTAGCTTTCAAGATGCAGACCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTTTGATTTGGGCTGCTTGGTCTCCAAATGGAACCGACGAGCCGAACTATGTTGGAGAGGGATTCGCTATGATTTCTGGAACCAGCATGGCAGCACCGCATATAGCTGGTATATCAGCTCTTGTAAAACAGAAGCATCCTAACTGGAGTCCTGCAGCCATCAAATCGGCTTTGATGACAACATCAACAACAATGGACAGAGCAGGAAGACCTCTTAAAGCACAACAGTTTTCTGAAACAGAAGCCATGAAACTGGTATCTGCAACACCTTTTGATTATGGGAGTGGTCATGTTAACCCAAGAGCTGCACTGGATCCGGGACTCATATTTGATGCAGGTTATGAAGATTACTTGGGATTTTTGTGCACGACGGCGGGTATCAATGTTCACGAGATACACAACTACACAAACTCACCTTGCAACTTCACCATGGGCCATCCCTGGAACCTCAACACCCCATCAATTACCATCGCCCATCTTGTGGGAACTAAGACTGTTACTCGCACAGTAACAAATGTTGCTGAGGAAGAAACCTATACAATTACTGCAAGAATGGACCCTGCTGTTGCCATAGAAACAAGTCCTCCAGCAATGACGTTACGATCCGGTTCATCGAGAAAATTCTCAGTAACTCTAACATCTCGATCACTGACCGGAACCTATAGTTTTGGCGAGGTTCTATTGAAGGGAAGTCGAGGGCACAAGAGGCCATTT 2523 44.59 SPAHDLPQIRLFLFRRLILKIWWISEVTFLTLETMVVNFQCTVLVFLVLLVVGKAEIYIVTIEGEPIVSYKGDLDGFEATAMESNEKIDPTSEIVTSYARHLESKHDMLLGMLFERGSFKKLYSYKHLINGFAVDITPEQAETLRHTPIVKSVEMDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPFGPCLKYKGKCEVDPDTKKEFCNGKIVGAQHFAEAAKAAGAFNPAIHFESPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHLNRTYTLVAANDVLLDSSVSKYSPSDCQRPDVLNKRLVEGKVLLCGYSFSFVVGTASIKKVSQTARALGAAGFVLAVENISPGSKFDPVPVGIPGILITDVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEGFAMISGTSMAAPHIAGISALVKQKHPNWSPAAIKSALMTTSTTMDRAGRPLKAQQFSETEAMKLVSATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNYTNSPCNFTMGHPWNLNTPSITIAHLVGTKTVTRTVTNVAEEETYTITARMDPAVAIETSPPAMTLRSGSSRKFSVTLTSRSLTGTYSFGEVLLKGSRGHKRPF 841
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3783766 3791671 - CmaCh05G007120.1 Cma05g00712 294830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma05g00712 841 Gene3D Peptidase S8/S53 domain 189 720 IPR036852 GO:0004252|GO:0006508
Cma05g00712 841 CDD PA_subtilisin_like 409 547 - -
Cma05g00712 841 SUPERFAMILY Protease propeptides/inhibitors 119 160 - -
Cma05g00712 841 Pfam Fibronectin type-III domain 752 832 IPR041469 -
Cma05g00712 841 Gene3D - 402 567 - -
Cma05g00712 841 CDD Peptidases_S8_3 163 666 IPR034197 -
Cma05g00712 841 Gene3D - 724 838 - -
Cma05g00712 841 ProSitePatterns Serine proteases, subtilase family, serine active site. 630 640 IPR023828 -
Cma05g00712 841 Pfam Peptidase inhibitor I9 58 160 IPR010259 -
Cma05g00712 841 ProSiteProfiles Serine proteases, subtilase domain profile. 156 707 - -
Cma05g00712 841 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 47 835 IPR045051 -
Cma05g00712 841 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 192 203 IPR023827 -
Cma05g00712 841 Pfam Subtilase family 187 668 IPR000209 GO:0006508|GO:0008236
Cma05g00712 841 PRINTS Subtilisin serine protease family (S8) signature 266 279 IPR015500 -
Cma05g00712 841 PRINTS Subtilisin serine protease family (S8) signature 629 645 IPR015500 -
Cma05g00712 841 PRINTS Subtilisin serine protease family (S8) signature 187 206 IPR015500 -
Cma05g00712 841 SUPERFAMILY Subtilisin-like 162 711 IPR036852 GO:0004252|GO:0006508
Cma05g00712 841 PANTHER CUCUMISIN-RELATED 47 835 - -
Cma05g00712 841 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 53 162 IPR037045 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma05g00712 Cma12g00908 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00712 Cma-Chr5:3783766 Cma07g00037 Cma-Chr7:249454 0 dispersed
Cma16g00551 Cma-Chr16:2835858 Cma05g00712 Cma-Chr5:3783766 1.71E-07 dispersed
Cma12g00908 Cma-Chr12:6963550 Cma05g00712 Cma-Chr5:3783766 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma05g00712 - - csv:101219351 1527.3