Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma05g00731 ATGGCTTCCACTGCCTTCCTTTCTCTCTCTGCAATGCTCCTTGTTTCTCTTGTGACCAAATTCATATTCCCCATGTCTCCAATTGCTTTGGGGGTCACCATCTTCCTTGCTCCTCTTCTTACTTACATCATCTCTTCCATGGCCTCCTCCTCCTCCTCCAAGCTTCCTCCTGGCCCTCTCTCCTTTCCCATCTTTGGCAATTGGCTCCAAGTTGGCAACGACCTCAACCATCGCCTTCTCGCTTCCTTGTGCCAAAGATTCGGCTCCATATTCCTCTTGAAGCTCGGCTCCAAGAACCTCGTTGTCGTGTCGGATGCCGAGCTTGCTAGCCAAGTTCTCCATGCTCAGGGCGTTGAGTTTGGCTCTCGTCCTCGAAACGTCGTGTTCGATATCTTCACTGGAAATGGTCAGGATATGGTGTTTACCGTTTATGGGGACCATTGGCGTAAGATGCGTAGAATCATGACGTTGCCGTTCTTCACGAACAAGGTGGTGCATAACTATAGTGGCATGTGGGAGGATGAGATGGACTCGGTGGTTCGTGATCTAAGGAGTAACGACAAGTTTCAATCCGAGGGGATAGTTATTAGAAAGCGTTTGCAGTTGATGCTGTACAATATCATGTATAGAATGATGTTTGATGCGAAGTTTGAATCCCAAGACGATTCTTTGTTCATTGAAGCGACTCGATTCAACTCGGAGAGGAGTCGATTGGCGCAGAGCTTTGAGTACAACTATGGAGATTTCATTCCTTTGCTTAGACCCTTCTTGCGAGGTTATTTGAACAAGTGCAGGGATTTGCAGGGTAGGAGGTTGGAGTTTTTCAACAAAAACTACGTCGAGAAGCGAAGGAACATTATGGCTGCCAATGGAGATAAGCACAACATAAGTTGTGCTATGGATCATATCATAGACGCTCAGTTGAAAGGCGAGATAAGTGAAGAGAATGTGATTTACATCGTAGAGAACATCAACGTGGCAGCGATAGAAACGACATTGTGGTCAATGGAATGGGCAATAGCGGAGTTGGTGAATCATCCAGACATCCAACACAAGATTCGGGAGGAGCTAAAAAATGTCCTAAAGGGAAACGAAGTGAGTGAATCCAACCTTCATGAACTGCCGTACTTGCAAGCAACAGTGAAAGAGACGCTGAGGCTGCACACTCCAATACCGTTGTTGGTGCCACATATGAACTTGGAAGAGGCGAAACTCGGAGGGTACACCATCCCAAAGGAGTCCAAGGTGGTGGTGAATGCATGGTGGCTCGCAAACAACCCCGAGTGGTGGAAGAACCCAGAAGAGTTCAGGCCAGAGAGGTTCTTTGAGGAAGAAAGTGGGACGGAAGCTGTTGCTGCAGGCAAGGTGGATTATCGGTTCTTACCATTTGGAGTTGGAAGGAGGAGTTGCCCTGGAATTGTGTTGGCAATGCCAATCTTAGGGCTCATCGTTGCCAAATTGGTATCCAAGTTTGAAATGAAGCCTCCAAGTGGGATGGAGAAGATCGATGTGACCGAGAAAGGAGGTCAATTCAGTTTGCACATTGCCAACCACTCCACTGTTGTGTTTAACCCCATAATTGCTTAA 1587 47.32 MASTAFLSLSAMLLVSLVTKFIFPMSPIALGVTIFLAPLLTYIISSMASSSSSKLPPGPLSFPIFGNWLQVGNDLNHRLLASLCQRFGSIFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSGMWEDEMDSVVRDLRSNDKFQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDSLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCRDLQGRRLEFFNKNYVEKRRNIMAANGDKHNISCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPDIQHKIREELKNVLKGNEVSESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPEWWKNPEEFRPERFFEEESGTEAVAAGKVDYRFLPFGVGRRSCPGIVLAMPILGLIVAKLVSKFEMKPPSGMEKIDVTEKGGQFSLHIANHSTVVFNPIIA 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4119909 4121761 - CmaCh05G007310.1 Cma05g00731 294849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma05g00731 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Cma05g00731 528 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00731 528 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00731 528 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00731 528 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00731 528 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00731 528 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00731 528 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00731 528 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00731 528 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00731 528 PANTHER OS02G0467000 PROTEIN 6 527 - -
Cma05g00731 528 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00731 528 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00731 528 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00731 528 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 6 527 - -
Cma05g00731 528 SUPERFAMILY Cytochrome P450 56 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00731 528 Gene3D Cytochrome P450 48 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00731 528 Pfam Cytochrome P450 56 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma02g00678 Cma-Chr2:4161597 Cma05g00731 Cma-Chr5:4119909 0 dispersed
Cma05g00731 Cma-Chr5:4119909 Cma20g00305 Cma-Chr20:1493472 0 dispersed
Cma12g00931 Cma-Chr12:7220212 Cma05g00731 Cma-Chr5:4119909 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma05g00731 K00487 - csv:105434566 979.933