Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma05g00855 ATGGTTGATCAAGAATGGTACAGTTCAAAAAGTGGAGTGTTGGGGGTGGCAACCTGCTTGGTTTGGACATGGATGATTATCCATAGATGGAACCAAAGGAAGAACACAGGTCCCAAGACATGGCCACTCCTAGGAGCCGCATTGGAGCAGCTCCTGAACTACCATAGAATGCACGACTGGCTTCTTGGTTACCTTAATCTCTCCAAAACTGTTGTGGTTCCTATGCCTTTCACTACTTATACTTACATTGCCGACCCTGCCAATGTCCAGCACATTCTCAAGACCAACTTCCCCAACTACCCTAAGGGCGACGCCTACCATTCCTACATGGAAGTGCTTCTTGGAGATGGGATCTTCAATGTGGATGGAGAGCTTTGGAGGAAGCAAAGGAAGACTGCTAGCTTCGAGTTTGCTTCAAAGAATTTGAGGGATTTCAGTGCCTTGGTTTTTAGAGAGTATAGCCTCAAGCTCTCGGATATTTTGACACGGGCGTCTTTGCATAACCAGCAGGTTGACATACAGGAATTGCTGATGAGAATGACTTTGGACTCCATATGCAAGGTGGGATTCGGGGTTGAAATTGGATCATTGGCTCCAAATTTGCCAGAAAATGGGTTCGCTAAGGCCTTTGACACAGCAAACATGATTGTCACCCTTCGCTTCATCGATCCTTTCTGGAAGATTAAAAGATTTCTGAATATGGGGTCCGAAGCTCTTCTTCAGAAGTCCATCAAAGTCATCGACCACTTCACCTACTCTGTCATTGCCACAAGGAAAAAAGAGATCCAACAAGCTCCAACCACCCCCAATAAGATAAAACATGACATATTGTCGAGATTTATCGAGTTAGGGGAAGACCCAAATAACAATTTCACGAACAAAAGCTTAAGAGATGTCGTTCTAAACTTCGTGATTGCTGGACGTGACACAACAGCTGCAACTCTTTCATGGGCTATTTATATGGTAATGACTCATAGCCATGTAGCTGACAGAGTTTACTCAGAGCTCAAGAGCTTTGAAGAAGAAAGAGCCAAAGAAGAGGGAATTTCATTGCTTCACCATCATCCATCTGATATCCAATCCTTTGAGAGAAGAGTAACGCAGTTTGCAGAACTGCTTAATTATGATTCTCTTAATAGATTACATTATTTGCATGCTATGATAACTGAGACGCTACGCCTATACCCTGCAGTCCCTCAGGATCCGAAGGGGGTTTTGGAGGATGATGTATTGCCTGATGGGACGAAGGTAAGAGCTGGAGGGATGGTGACATATGTTCCTTACTCAATGGGAAGAATGGAATACAATTGGGGTTCTGATGCAACTTCTTTTAACCCTCAAAGATGGCTCAAACAAGACGTTTTTCATAACGAATCTCCGTTCAAATTCACAGCATTTCAGGCAGGACCAAGGATCTGCATGGGGAAAGACTCGGCATATCTACAGATGAAAATGGCGCTTGCCATTTTGTGCAGATTCTACAAATTTAGTTTGGTGAGTGGGCATGAAGTGAGCTACAGAATGATGACTATTCTGTCCATGGCCAATGGCTTGAAAGTTACCGTAGCTCGACGCTCTTAA 1581 44.02 MVDQEWYSSKSGVLGVATCLVWTWMIIHRWNQRKNTGPKTWPLLGAALEQLLNYHRMHDWLLGYLNLSKTVVVPMPFTTYTYIADPANVQHILKTNFPNYPKGDAYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSALVFREYSLKLSDILTRASLHNQQVDIQELLMRMTLDSICKVGFGVEIGSLAPNLPENGFAKAFDTANMIVTLRFIDPFWKIKRFLNMGSEALLQKSIKVIDHFTYSVIATRKKEIQQAPTTPNKIKHDILSRFIELGEDPNNNFTNKSLRDVVLNFVIAGRDTTAATLSWAIYMVMTHSHVADRVYSELKSFEEERAKEEGISLLHHHPSDIQSFERRVTQFAELLNYDSLNRLHYLHAMITETLRLYPAVPQDPKGVLEDDVLPDGTKVRAGGMVTYVPYSMGRMEYNWGSDATSFNPQRWLKQDVFHNESPFKFTAFQAGPRICMGKDSAYLQMKMALAILCRFYKFSLVSGHEVSYRMMTILSMANGLKVTVARRS 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5843900 5847099 - CmaCh05G008550.1 Cma05g00855 294973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma05g00855 526 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00855 526 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00855 526 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00855 526 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00855 526 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00855 526 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00855 526 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00855 526 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00855 526 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00855 526 PANTHER CYTOCHROME P450 16 524 - -
Cma05g00855 526 PANTHER CYTOCHROME P450 704B1 16 524 - -
Cma05g00855 526 Gene3D Cytochrome P450 20 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00855 526 Pfam Cytochrome P450 37 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma05g00855 526 SUPERFAMILY Cytochrome P450 27 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00855 Cma-Chr5:5843900 Cma17g00437 Cma-Chr17:2600115 4.44E-128 dispersed
Cma05g00855 Cma-Chr5:5843900 Cma14g01995 Cma-Chr14:14010641 3.41E-140 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma05g00855 K20495 - csv:101222076 897.116