Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma05g00968 ATGGGCGGCGGTGGCGGTGGCGGTGCTCAAAGTAGAGAGTTGGATCAAACTCCGACATGGGCCGTTGCCGCTGTTTGTGCAGTCATCATTCTCATTTCCATCATATTGGAAAAAGTTCTTCATAGGGTTGGAGAGATATTTCAAAGAAAGAAAAAGAAAGCATTGTACGAGGCGCTCGAGAAGGTTAAAGGCGAGCTTATGGTTTTGGGATTCATTTCTTTACTCTTAACATTCGGACAAAACTATATTGCTGAAGTTTGCATACCTTCAAGGTATGCAAATACCATGTTGCCTTGCCCTTATAGAGGGAAATCACATCAAAGCTCACATGGCATCGAACCCGAAGAACACGAGGAAGACGCCCACGATCACCACCGTAGGCTTCTTTGGTACGGGCATCGACGTCTCAGCGGCGGTCACATAAAAAGTTGCAAACCAGGATATATGCAACTTATATCTCTAAATGGGTTGCATCAATTACATATCTTCATCTTCTTTCTAGCCGTTCTCCATGTTGTCTTTAGCGGCATAACGATGACTCTCGGAAGATTGAAAATTCGTGGATGGAAAGTATGGGAAAAACTGACTGAACAAGAACACGAGGCCATGAACGATCCTACAAGGTTTCGACTTACTCACGAGACATCGTTTGTAAGAGATCACAGTAGTTTCTGGACCAAAACGCCCCTCTCCTTTTACTTTGTGTGCTTTTTTAGGCAATTCTTCCGGTCGGTTAGTAGGGCCGATTACTTGTCTCTTAGACATGGTTTCGTCACGGTTCATTTAGCACCCGGGAGTAAATTTGACTTCCAAAAGTACATCAAAAGGTCATTAGAAGATGACTTCAAGGTGGTTGTCGGAATCAGTCCTCTACTATGGGCATCAATGGTGCTTTTTCTGCTTCTCAATGTTAGTGGGTGGCAAGTTATGCTTTGGGTGTCCATATTTCCTCTGGTGGTGATCCTAGCCGTTGGAACGAAGCTGCAAGGAATCATAACGCAAATGGCGCTTGAAATCAAGGAAAGACATGCCGTGGTTCAAGGGATTCCCCTGGTCCAAGTCTCTGATAGACACTTCTGGTTCAGTTGGCCCGTTTTGGTTCTTTATCTCATCCATTACGTCCTCTTCCAGAATGCATTTGAGATTACATATTTCTTTTGGATATGGTATGAATTTGGGTTGAGATCATGCTTTCACCAAAATTTTGATCTTATTATCGTCAGAGTTGCCCTTGGGGTTGGAGTACAGATTTTGTGCAGCTACATTACACTCCCGTTGTATGCTCTTGTCACTCAGATGGGATCGACCATGAAGAAATCTATATTCGATGAACAAACTTCAAAAGCATTGAAGCAATGGCATAGAAGTGCTTTGAAGAAAAAGAACGAAGGGGGAAAGCCAGATCCAATGCCAATGCGAACACTGGGCGGAGGCGGAGGCAGTGGAAGCCCTCCCGAGTCACCGACGGAAGGCTCGCATGAGTTCCAGCATCATTCAGACCCTCTACGACCACCCAACGACGTCGAAGCCTCCACCATTCCTTCGGCCAACATAATCGCCACCGTCGATCTTCAGCAGCAGCAGAATTACGCGAATCGTGACTTGTTGAGCTGA 1614 45.42 MGGGGGGGAQSRELDQTPTWAVAAVCAVIILISIILEKVLHRVGEIFQRKKKKALYEALEKVKGELMVLGFISLLLTFGQNYIAEVCIPSRYANTMLPCPYRGKSHQSSHGIEPEEHEEDAHDHHRRLLWYGHRRLSGGHIKSCKPGYMQLISLNGLHQLHIFIFFLAVLHVVFSGITMTLGRLKIRGWKVWEKLTEQEHEAMNDPTRFRLTHETSFVRDHSSFWTKTPLSFYFVCFFRQFFRSVSRADYLSLRHGFVTVHLAPGSKFDFQKYIKRSLEDDFKVVVGISPLLWASMVLFLLLNVSGWQVMLWVSIFPLVVILAVGTKLQGIITQMALEIKERHAVVQGIPLVQVSDRHFWFSWPVLVLYLIHYVLFQNAFEITYFFWIWYEFGLRSCFHQNFDLIIVRVALGVGVQILCSYITLPLYALVTQMGSTMKKSIFDEQTSKALKQWHRSALKKKNEGGKPDPMPMRTLGGGGGSGSPPESPTEGSHEFQHHSDPLRPPNDVEASTIPSANIIATVDLQQQQNYANRDLLS 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7813496 7819212 - CmaCh05G009680.1 Cma05g00968 295086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma05g00968 537 Pfam Mlo family 12 464 IPR004326 GO:0006952|GO:0016021
Cma05g00968 537 PANTHER MLO-LIKE PROTEIN 5-RELATED 6 475 - -
Cma05g00968 537 PANTHER MLO-LIKE PROTEIN 1 6 475 IPR004326 GO:0006952|GO:0016021
Cma05g00968 537 MobiDBLite consensus disorder prediction 458 514 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00968 Cma-Chr5:7813496 Cma07g00379 Cma-Chr7:1625474 0 dispersed
Cma20g01051 Cma-Chr20:7843989 Cma05g00968 Cma-Chr5:7813496 1.99E-109 dispersed
Cma05g00968 Cma-Chr5:7813496 Cma03g00619 Cma-Chr3:5399530 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma05g00968 K08472 - csv:101208890 872.848